Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3324 ATGGGTCGTGTCAGAACCAAAACCGTGAAAAAATCCTCACGCCAAGTTATCGAGCGTTACTACTCACGCATGACCCTTGATTTCCACACCAACAAGAAAATCCTCGAAGAAGTTGCATTGATTCCATCAAAGCGTCTTCGCAACAAGATCGCTGGATTTTCAACCCATCTCATGAAGCGGATCCAGAAAGGACCAGTTCGTGGAATCTCATTGAAGCTTCAAGAGGAAGAGCGTGAGAGGAGGATGGATTTCGTTCCTGATGTTTCTGCTATCAGGACTGACCACATCGAGGTTGATAAGGAGACTCTTGACATGCTTGCTGCTCTTGGTATGTCCGAGATTCCCGGTGTTGTTCAGGTTGACCCTGTTCCTGTTCAGCAGGTGCCGTTTGGAAGAGGTGCTGTTGGTGCTGCTGGTGGTGCTGGTGGAAGGAGGTTTTGA 441 0.4853 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDHIEVDKETLDMLAALGMSEIPGVVQVDPVPVQQVPFGRGAVGAAGGAGGRRF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3324 146 PANTHER 40S RIBOSOMAL PROTEIN S17 1 137 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mal1g3324 146 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mal1g3324 146 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mal1g3324 146 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mal1g3324 146 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Mal1g3324 146 PANTHER 40S RIBOSOMAL PROTEIN S17 1 137 - -
Mal1g3324 146 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3324 Mal-Chr1 54935577 54936017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3324 1 146 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 79.452 8.23e-78 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3324 K02962 - gmx:100785402 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3324 1 54935577 54936017 Mal1g3324 1 54935577 54936017 ECH