Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3312 ATGGTGAATTCTGATGTGACTAGGATTATTAATTCTGATGAGGTTCAGAGTGATGTTAGGCCTGTGAAGAAGGAGGTGAAGAGGGCTACCTTGAAGAAGAATCCTTTGAAGAATTTGAATGTTATGCACAGACTTAATCCTTATGATAAGACTGCTAAGAGGATGATTTTGCTTGCTGATCATAAGAGGATTGCTGCTGCTAGGAAGACTCCTTTGACCATATCTGGAGAAGTATACGACCGAAGGACTGGTTTGAAGTATAAGATCCATTATGATGAAAATACCACGAGGTTGATGACTGGCATTAGGTCAAATTGGCCTCGACGTTCGCGTAGCTTCCCCAAATCTTTATCACCTTACACTCTTGCAATGTATCCTGTCAAAACACAAACACCCGTTGAGAAATTACAAGAAGAGCTGAAGTTTAAGGAGATAATTTTGCAGTCTGTTCAAAAGAGAGTTGCAAACCTTAATGATGGTTATGTGAAGTCCGTTTTGGAGGATCAGGAAAGAGAGCTGAAGTACGAGGTGGACAAACTAGTTGATGAGTTGAAGGAGATGGAGTAG 567 0.4074 MVNSDVTRIINSDEVQSDVRPVKKEVKRATLKKNPLKNLNVMHRLNPYDKTAKRMILLADHKRIAAARKTPLTISGEVYDRRTGLKYKIHYDENTTRLMTGIRSNWPRRSRSFPKSLSPYTLAMYPVKTQTPVEKLQEELKFKEIILQSVQKRVANLNDGYVKSVLEDQERELKYEVDKLVDELKEME* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3312 188 PANTHER BNAC03G35890D PROTEIN 1 68 - -
Mal1g3312 188 PANTHER 60S RIBOSOMAL PROTEIN L4 1 68 IPR045240 -
Mal1g3312 188 Pfam 60S ribosomal protein L4 C-terminal domain 1 63 IPR025755 -
Mal1g3312 188 Coils Coil 163 188 - -
Mal1g3312 188 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3312 Mal-Chr1 54506483 54507049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3312 1 64 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 71.875 1.01e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3312 K02930 - egt:105952891 103.219