Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3292 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTTGCCAAGAAGGTGAAGGCTAGTGGTGGAACTGGAGCTGACTCAAACACTGATCCTCCCTACAATGAATGTTTGTTGAAGGGATGTGAAGAAGAATTCTCCACAAGCACAACTCCAACCGGTTTTTTTGCACTTTATGTGGGGGAAGAACACCAGAGACATGTGGTTCCAACAACCTATCTTTCTCACCCTTTATTCAAGATGCTGTTGGAGAAGTCATACAATGAATTTGGATTTGAGCAGAGGAATGGTTTGGTAGTTCCATGTAGTGTTTCAACATTTCAAGAGGTTGTAAATGCTATTGAATGCAACAATGGCAAGTTTCACTTAGGCAAGATTTTTCAAGATTTTGTAGTGTAG 393 0.402 MLGKKMVSLKKLAKKVKASGGTGADSNTDPPYNECLLKGCEEEFSTSTTPTGFFALYVGEEHQRHVVPTTYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFHLGKIFQDFVV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3292 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 129 IPR003676 GO:0009733
Mal1g3292 130 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 129 - -
Mal1g3292 130 Pfam Auxin responsive protein 26 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3292 Mal-Chr1 54051407 54051799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3292 40 120 Calmodulin-binding Proteins AT5G20810 44.444 1.50e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3292 K14488 - gmx:100790208 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3292 1 54051407 54051799 Mal1g3292 1 54051407 54051799 ECH