Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3288 ATGCCAATCTCATATTCACTCTCACTCTCATCATCATCATCATCCATTCTCCCAAACCTCCGTCCAATCCAATTCCGAACCAAAAACAACCACCACTTCCCAAACCTAAAAATCCAAAGCAGCTCCATCCGAACCAACCACACAATCCAATTCCTAAAACCACACCTAATCTCCCAACAAAAACCAATCCTCTACGGTTGGCTCTGCAGCGCAATCTCCGTCTACTCACTCTCCAACCTTCTCTCGAAATTCTCCGCCATCACCACCGCCACAACAACCGTCGACGTTGCGCAGGGATTCGTGCTCGGCGGTTTGGTTCTTGTTCGGTTGATTGCCACGTATGCACAGCACGCGCTTCTTTGGGAAGCTTCGCTGAACGCGGTGTATGATGTTCGTGTTCACGTTTTCGATCGTGTGATGCAGAGGGAACTTGCGTTTTTTGAAGCGAACGACGCCGTTTCGAGTGGGGATATTGCTTATAGAATTACTGCTGAAGCTTCTGATCTTGGAGTTACGTTATACACTCTTCTTAATACCATAGTACCCAGTACTCTGCAATTGTCTGCAATGATAATGCATATGTTGGCTATAAGTCCTGCCCTTTCTTTGATTTCAGCTATGGTTATTCCTTGTATGGTTCTAGTTGTGGCCGTTCTTGGTCAAGAACTTCGCAAAATATCTAAAAAGTCACATATTACCATTGCTGCTCTCTCAGCTTATCTAAATGAGATTCTGCCCGCGTATCTCTTTCTGAAAGCAAACAACGCAGAGTCACTTGAGAGTGTTAGGTTTAAGAGACTGGCCCTGATGGACTGTTCTGCAATGATGAACAAAAAAAGGATGAAAGCAGTCATTCCCCAGGTTATTCAGGCTATTTATTTTGGAGTTCTTTCCATACTTTGCGCAGGTTCGGTGGTGATTTCAAGAGGTTCATTTGATCGCTGTAGCTTGCTTTCATTCGTGACTTCATTGCTTTTCTTAATTGAGCCTATTCAGGATGTAGGAAAAGCTTACAATGAATGGAGGGAGGGAGAACCAGCTATTGAACGCTTGTTTGCTATGACCAGTTTCAAAAATAAGGTGGTTGAGAAACAAGATGCTGTTGATTTGGACTATGTTACAGGGGACCTGAAATTCTATGATGTCTCCTTTAAGTACAATGATGGCCTACCTCATATCTTAAATGAATTGAATCTTCACGTTACACCTGGAGAGATAGTTGCTATCGTTGGCCCGTCTGGGGGAGGAAAAACAACACTTGCAAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGTTCTATACTGATTGATAACCAAAACATCCAGAACATTCGTTTGCAGAGTTTAAGAAGACATGTTGGTGTAGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGACAACAAAAATTGACATGGAGAAAGTGAAACGTGTAGCTCAAACTGCTTATGCAGACGAGTTTATTCGAAAACTTCCTGAAGGATACAATACCAATATTGGACCAAGAGGCTCAACTTTAAGTGGAGGCCAGAAGCAAAGGTTGGCTATTGCAAGGGCTTTCTATCAAAATTCATCTATATTGGTTCTGGACGAGGCAACTTCTGCGTTGGATAGTAAATCTGAGTTATTAGTGAGACAAGCTGTTGAGCGTTTAATGGAAAATCGCACGGTGCTTGTGATCTCTCATCGCTTGGAAACCGTTATGATGGCTAAAAGAATATTCCTTTTGGATAATGGAAAGCTAGAAGAGCTACCTCGTTCAACTATGTTGAATGGTCACATGGATTCATTGCTATCTTCTGGTCGTATTGTTTGA 1848 0.4226 MPISYSLSLSSSSSSILPNLRPIQFRTKNNHHFPNLKIQSSSIRTNHTIQFLKPHLISQQKPILYGWLCSAISVYSLSNLLSKFSAITTATTTVDVAQGFVLGGLVLVRLIATYAQHALLWEASLNAVYDVRVHVFDRVMQRELAFFEANDAVSSGDIAYRITAEASDLGVTLYTLLNTIVPSTLQLSAMIMHMLAISPALSLISAMVIPCMVLVVAVLGQELRKISKKSHITIAALSAYLNEILPAYLFLKANNAESLESVRFKRLALMDCSAMMNKKRMKAVIPQVIQAIYFGVLSILCAGSVVISRGSFDRCSLLSFVTSLLFLIEPIQDVGKAYNEWREGEPAIERLFAMTSFKNKVVEKQDAVDLDYVTGDLKFYDVSFKYNDGLPHILNELNLHVTPGEIVAIVGPSGGGKTTLAKLLLRLYDPISGSILIDNQNIQNIRLQSLRRHVGVVSQDITLFSGTVAENIGYRDLTTKIDMEKVKRVAQTAYADEFIRKLPEGYNTNIGPRGSTLSGGQKQRLAIARAFYQNSSILVLDEATSALDSKSELLVRQAVERLMENRTVLVISHRLETVMMAKRIFLLDNGKLEELPRSTMLNGHMDSLLSSGRIV* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3288 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 595 IPR027417 -
Mal1g3288 615 Gene3D - 368 613 IPR027417 -
Mal1g3288 615 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 39 605 IPR039421 -
Mal1g3288 615 CDD ABC_6TM_exporters 99 351 - -
Mal1g3288 615 SUPERFAMILY ABC transporter transmembrane region 73 355 IPR036640 GO:0005524|GO:0016021
Mal1g3288 615 SMART AAA_5 403 591 IPR003593 -
Mal1g3288 615 Pfam ABC transporter transmembrane region 99 330 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3288 615 Pfam ABC transporter 394 545 IPR003439 GO:0005524
Mal1g3288 615 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 614 IPR003439 GO:0005524
Mal1g3288 615 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 68 343 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3288 615 ProSitePatterns ABC transporters family signature. 517 531 IPR017871 GO:0005524
Mal1g3288 615 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 39 605 - -
Mal1g3288 615 Gene3D ABC transporter type 1, transmembrane domain 58 355 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3288 Mal-Chr1 54012630 54019260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3288 345 613 Calmodulin-binding Proteins AT2G36910 42.857 3.82e-56 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3288 1 54012630 54019260 Mal1g3288 1 54012630 54019260 ECH