Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3264 ATGGCGGAAGAACAACCATGCCAAGCACCTGAAGGCCACCGTCTCTGCGCCAACAACTGCGGCTTCCTCGGTAGTCCAGCCACCATGAATCTCTGCTCAAAATGCTACGGTGATGCTTCCACAAAATCCACCATCGAAAACGCTCTCTCATCTTCTTCCACCGTCGTCGCATCCGTCGCTCCACCGTCGATTTCCACATCGGAGCCAGCCGTTGTTTCCGTCGAATCTATCGAGATCGTGTTGAGTTCTGTAACCACCGGTTCAGTTTCTGTTTCTGTTACGGTTCAACCGAACCGGTGTGTGACGTGTCGAAAGCGCGTTGGGTTGACCGGGTTTAAGTGTAGATGCGGGTCGACGTTTTGTGGGTCCCACAGGTACCCGGAGAGACACGGTTGTGGATTTGATTTTAAGACAGTGGGAAGAGAGGAAATTGCTCGAGCGAATCCTTTGATTAGAGCGGAGAAGCTGAGGAGGATTTGA 480 0.5229 MAEEQPCQAPEGHRLCANNCGFLGSPATMNLCSKCYGDASTKSTIENALSSSSTVVASVAPPSISTSEPAVVSVESIEIVLSSVTTGSVSVSVTVQPNRCVTCRKRVGLTGFKCRCGSTFCGSHRYPERHGCGFDFKTVGREEIARANPLIRAEKLRRI* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3264 159 PANTHER BNAC06G14100D PROTEIN 1 159 - -
Mal1g3264 159 Pfam AN1-like Zinc finger 102 136 IPR000058 GO:0008270
Mal1g3264 159 ProSiteProfiles Zinc finger AN1-type profile. 94 140 IPR000058 GO:0008270
Mal1g3264 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 159 - -
Mal1g3264 159 Gene3D - 1 62 - -
Mal1g3264 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 53 - -
Mal1g3264 159 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Mal1g3264 159 SUPERFAMILY AN1-like Zinc finger 93 154 IPR035896 -
Mal1g3264 159 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mal1g3264 159 Gene3D - 81 155 IPR035896 -
Mal1g3264 159 SMART AN1_Zf_4 100 137 IPR000058 GO:0008270
Mal1g3264 159 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3264 Mal-Chr1 52771273 52771752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3264 1 159 C2H2 Transcription Factor Family AT3G52800 54.913 1.53e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3264 - - lang:109347531 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3264 1 52771273 52771752 Mal1g3264 1 52771273 52771752 ECH
Mal3g4363 3 123185610 123186110 Mal1g3264 1 52771273 52771752 PCT