Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3259 ATGGACTCACACAAGCAAATTTTCATCTTCTTATGTCTTTCGCTAGTACTTGTACTTCTCTCAGGGCTGCAAGCTGAGGCCAGTCGTCACCTCAAATATCATCATTCAAAAGAATTGTTCATTTTTGGGGACTCATATGTTGATACAGGCAACACCCAAAAAAGTAAACCCGGATCATGGAAAGAACCTTATGGCATAACCTTCCCCGGAAAACCCGCCGGAAGATTCTCCGATGGTAGAGTTTTAACTGACTTCATTGCCAAGTACCTGGGATTGAGATCACCTATCCCTCACAAATTCAGGAACATTGTACCTAAGCATTATTTGAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATCTTCTTCAGGTCCAAATATGACAACCCAAATTGATTCCTTCAACCAACTCATCCAAGAAAATGTCTATACTTCCTCAGATCTCACCAAATCTATTGCTTATGTCTCTGTTGCTGGAAATGACTACAACCACTACTTGGCCACAAATGGTTCTCTTTTGGGTTTCCCATCTTTCATTGCCTCAGTGATTGAACAAACAACCACCAATTTGATTCATCTCCAAAGCTTAGGATTTAAGAGAATTGTTGTGGGTGATTTACAACCTCTTGGTTGTCTTCCTCAAGCCACTGCTCAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGATCTTGTAGCTCTCCACAACAACTTATTGAAACAATCTGTTACAAAGTTGAACCAAGAAACCAAGGATCACACCACATTCACAATCCTAGGCATTTTCGATAGTTTCAGGTCGGTGTTGAATCACCCTTCAAGCCATAACATTAAGGAACGTTTGAAGCCATGTTGCGTCGGAGTAAGCAGTGAATATAATTGTGGAAGTGTAGATTCTGAACATATTGCTAAAAAATATTTGGTTTGTGAAAATCTTGAATCAACTTTCTTTTGGGATAAGTTACACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGAAGAAGAAAGGCCTTCATCAAATTTTGTACTAG 1053 0.3922 MDSHKQIFIFLCLSLVLVLLSGLQAEASRHLKYHHSKELFIFGDSYVDTGNTQKSKPGSWKEPYGITFPGKPAGRFSDGRVLTDFIAKYLGLRSPIPHKFRNIVPKHYLKYGMNFAYGGTGVFDTSSSGPNMTTQIDSFNQLIQENVYTSSDLTKSIAYVSVAGNDYNHYLATNGSLLGFPSFIASVIEQTTTNLIHLQSLGFKRIVVGDLQPLGCLPQATAQTSFQSCNSTFNDLVALHNNLLKQSVTKLNQETKDHTTFTILGIFDSFRSVLNHPSSHNIKERLKPCCVGVSSEYNCGSVDSEHIAKKYLVCENLESTFFWDKLHPTQAGWNAVYNELKKKGLHQILY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3259 350 PANTHER OSJNBB0059K02.9 PROTEIN 1 349 - -
Mal1g3259 350 CDD SGNH_plant_lipase_like 39 340 IPR035669 -
Mal1g3259 350 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 349 - -
Mal1g3259 350 Pfam GDSL-like Lipase/Acylhydrolase 39 338 IPR001087 GO:0016788
Mal1g3259 350 Gene3D SGNH hydrolase 29 343 IPR036514 -
Mal1g3259 350 SUPERFAMILY SGNH hydrolase 38 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3259 Mal-Chr1 52558426 52570263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3259 39 346 Acyl Lipid Metabolism Gene Families AT4G10950 27.273 6.72e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3259 - - mtr:MTR_1g060520 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0173 1 1911387 1917881 Mal1g3259 1 52558426 52570263 ECH
Mal1g3259 1 52558426 52570263 Mal1g3259 1 52558426 52570263 ECH
Mal3g4359 3 123122223 123126241 Mal1g3259 1 52558426 52570263 PCT