Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3254 ATGAAGGTGGTTGCTGCCTACTTGCTTGCTGTTCTTGGAGGCGACAACACTCCCTCCGCTAAAACCATCAAGGACATCCTCGGCTCTGTTGGAGCAGATGCAGAAGATGATAGAATTGAGTTGTTTTTGTCTGAAATTAAGGGCAAAGATATAGCTGAGGTTATTGCTTCTGGTAGGGAAAAGTTGGCTTCTGTTCCTTCTGGTGGTGGCGGTGGTGCTGTTGCTGCTGCACCTGCAAGTGGTGGTGGTGCTGCTCCTGCTGCTGCTGAGGCTAAGAAAGAGGAGAAGGTGGAGGAGAAAGAGGAGTCTGATGATGATATGGGTTTCAGTCTTTTTGATTAA 342 0.4825 MKVVAAYLLAVLGGDNTPSAKTIKDILGSVGADAEDDRIELFLSEIKGKDIAEVIASGREKLASVPSGGGGGAVAAAPASGGGAAPAAAEAKKEEKVEEKEESDDDMGFSLFD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3254 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 113 - -
Mal1g3254 113 MobiDBLite consensus disorder prediction 64 113 - -
Mal1g3254 113 Gene3D - 1 59 IPR038716 -
Mal1g3254 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mal1g3254 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mal1g3254 113 Pfam 60s Acidic ribosomal protein 18 112 - -
Mal1g3254 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3254 Mal-Chr1 52281771 52283338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3254 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 67.257 1.01e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3254 K02943 - aof:109825870 127.102