Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3248 ATGGGCTCATACTCGGGCACTTGTGAAATTGTTGAAGTGAGGGAAGACGTAAGTGCAGTGAAAGATGCAAGGATATATCCGTCCAGTTCTGGATATAGTGTGGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAGTCTAGATGATGATATTAATAAGCTGTTTGAATCAATTAGTCTCAGATCTTCATCAAGGGATATTAGCTATCTACCAGATGGAACAAGTCCTAAGATGAAAAGTGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCAGGGCCTTCTAATGTTGAAAGTAAAGGGAGTTCAACTGAAATATCTCCGGTGCTGGAAGAAAGCAACTCACTTACCTTGAATAAAGAATCAAAGTCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCGTTCTTCCAAAATCGCAGTTGCAACTACACAAGACGATTCGGGAGCTTCACTCATGCAAAGTGATTTGGAATGTTCATCAAGTAAAGTTGAGGATTCCTCTCAACCATCAGAACCTACTCAAATAGAAAATCAAACGCCCGACTCCTCGCCATCTTGTTGCAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTATGCGGAAAGGTATGTCACAAACAACATCTTCATCTACTTCAATAAATGGCAATAGAGTGTGCAAACTTTCGCGTCATAGCCCCCGAGCAGTAAAGTCGGTCATAAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAACAGGGTTCTGATTCTGCTGTGCATGTTCCTCAGTCAAATGTAACAAATAACAAGTCAGTTCCCGCCACAACTCCACTTGTTTGCGAGAGATGTTGGTGTGAAATAGAAAACAGCAAAGGTAATATAACACCGGGCCCTGCAGAGGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCGCCACCACCAACTGGTTGTAATAGCAGCAGAGAAGTTGCAAAAGTGAAAAAGAATGCCAGATTGAAAGAGCAGCTTGATTTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATAGAGTCTTGGGATTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACTGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAGTTTTTGGCAAGAAGAAAGAAGATGCCTAGGGCTCAAACTGAAAGGGAAATACTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACGTCAGAAAATCTGTCATGTCTGGTAATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTACGTAGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGATGGTCACATTATGCTCACAGATTTTGACCTTTCACTCAGGTGTGACGTTAACCCAACGCTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGCGGCAAAAGCAAGGAAACTAAAAGCTGATCTGGCTGCTCATATCAGATCATTGCCACAGCTTGTGGCAGAGCCCACAGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATACGGCAGAACACCCTTCAAAGGCTCTAATAATGAAGAAACATTAGCCAACGTTGTGTTGCAAAATCTCAGATTCCCCGATAGCCCATTTGTTAGTTTCCAAGCGAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTACAGAGAAAGGTGCTGCAGAGATTAAACAACATCCGTTCTTCGAGGGCCTTAATTGGGCCTTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAAGGTGGTAAATATTTAGAGTGTACAACAACGGGTGGACAAGTGGAATTTGAGTTGTTTTAG 2577 0.4214 MGSYSGTCEIVEVREDVSAVKDARIYPSSSGYSVAEKNQKLPPLKLGYKDSLDDDINKLFESISLRSSSRDISYLPDGTSPKMKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVESKGSSTEISPVLEESNSLTLNKESKSLQTSKSVLSQNVRSSKIAVATTQDDSGASLMQSDLECSSSKVEDSSQPSEPTQIENQTPDSSPSCCNTNGSKVELPEKDSSPKKLGNKASMRKGMSQTTSSSTSINGNRVCKLSRHSPRAVKSVIKNKSLGKKKPKQGSDSAVHVPQSNVTNNKSVPATTPLVCERCWCEIENSKGNITPGPAEGINLKSVLSGPPPPTGCNSSREVAKVKKNARLKEQLDFSQSSKSSQGDYSSSTSTSDESNVSGSSCGNRPHMSKDFRWQAIRDAQMQHRVLGLRHFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVNPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPAAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3248 858 MobiDBLite consensus disorder prediction 153 180 - -
Mal1g3248 858 MobiDBLite consensus disorder prediction 410 444 - -
Mal1g3248 858 MobiDBLite consensus disorder prediction 378 397 - -
Mal1g3248 858 MobiDBLite consensus disorder prediction 332 347 - -
Mal1g3248 858 SUPERFAMILY Protein kinase-like (PK-like) 447 820 IPR011009 -
Mal1g3248 858 MobiDBLite consensus disorder prediction 214 266 - -
Mal1g3248 858 Gene3D Phosphorylase Kinase; domain 1 469 550 - -
Mal1g3248 858 Gene3D Transferase(Phosphotransferase) domain 1 551 619 - -
Mal1g3248 858 MobiDBLite consensus disorder prediction 214 347 - -
Mal1g3248 858 CDD STKc_phototropin_like 469 822 - -
Mal1g3248 858 Gene3D Transferase(Phosphotransferase) domain 1 696 818 - -
Mal1g3248 858 ProSiteProfiles Protein kinase domain profile. 471 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3248 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Mal1g3248 858 MobiDBLite consensus disorder prediction 282 302 - -
Mal1g3248 858 PANTHER FLIPPASE KINASE 1-RELATED 1 858 - -
Mal1g3248 858 SMART serkin_6 471 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3248 858 MobiDBLite consensus disorder prediction 409 445 - -
Mal1g3248 858 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 858 - -
Mal1g3248 858 Pfam Protein kinase domain 472 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3248 858 Pfam Protein kinase domain 700 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3248 858 MobiDBLite consensus disorder prediction 74 100 - -
Mal1g3248 858 MobiDBLite consensus disorder prediction 306 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3248 Mal-Chr1 52171582 52175826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3248 1 858 AGC Kinase Gene Family AT3G52890 52.042 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal1g3248 Pkinase 2.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3248 - K08286 gmx:100813470 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4355 3 123099993 123103486 Mal1g3248 1 52171582 52175826 ECH
Mal1g3248 1 52171582 52175826 Mal1g3248 1 52171582 52175826 ECH
Mal3g4012 3 118616013 118616776 Mal1g3248 1 52171582 52175826 PCT
Mal3g4355 3 123099993 123103486 Mal1g3248 1 52171582 52175826 PCT