Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3244 ATGATGGCATCTCAAAAGCACTTACATGAGCTACTCAAAGAAGATCAAGAACCATTTCTTCTAAATAGCTACATTTCACAAAAACGTAACCAATTAAAAAGACCTTCTCCAAACACCACTTTACAATTGAAGAAACAAAAACCACCACCAACAAAAACAATTAACCTATGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAGAAAATCACCAATCTTTGAATACTCATCACCAGCAAAAAGTCCCATTAGAATCCCTGCCAAAACGGCGTCGCTTTTACTTGAAGCAGCTCTCAAAATTCAGAGCAAAAACAAAAACAAATCCTTTGGTGTTTTTGGTTCGTTTTTCAAGAAACTAACACAAAGAAACAGAAACAAAAAGAGTGAGAATGAAGAAAATGTTTCTGTTAAGGATATTTTAAGATGGGATTCTTCTATTGGTAGAAAAAATCGAAAATCTTTCAACAACATAGTTGAAGTTGAAGAAGAAAACAGAGGATTTGAGGTGTGTTCTTGCAATGGAAGACCAAGCTGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCTTTGGATATGGAAACTTCGAGTAGTGGACATTCTTGTGAATCTGTTGAAGAGGTTGAGTTTGTGATGATGAAGAAGAAAGAAAATGGAGAATGTGATTGTTTTGATCAACATGGGTTTTTCTGTGAAAGCCCTTTTCGTTTTACTCTTGAAAGGAGTGTGTCCTCTTCCTCCGGCCGCTGTACGCCGGAGTTTTCATCGCCGGTGGATTCACCTAGTCGCCACCAAACAGAGGACAAAGAAAATAATGGAGTTGATGGCGTCAACAAATTTCAATCAGTGGAAGATGAGGAAGAGAAGGAACAATTTAGTCCTGTATCTGTTTTAGATCCACTCTTTGAGGATTATGATGATGATGATTGCCATGAAAACGACGATGAAGTGGGTGATTTTGATTTGGAGTGTAGCTACGCCAATGTACAAAAAAGCAAGCAACTACTATTAGAGAGGCTTCGTAGATTTGAGCAACTTGCAGAGTTAGATCCACTAGAACTTGAGAAAAGAATGCAAGAAGATAACGAGTACGAAGACGATGATAATGAAGAAGATGAATGTGAAGCATCATGTGAAGAGAAGGCATTGAGAGAAATAGTTTGTGAAATCCTCTGCCATCCAAGTGTTCATGAAAGATGGCAAGACCAAAAAGTTCTTAAGAGACTTGTTTATGATCTCATTAAGGAGGAAGAGAAAGAACTTAATTTTTCACAAGATATGGACATTGTAATGAAAAGGGTATGCAAGAAGATGGAATTGTGGAAACAAGTGGAGTCTAACACTATTGATATGATGATTGAAGAGGACTTCTCTAGAGAGGAATTTGGGTGGAAGAAAAATGCTGAGGAGACAAAAGAGCTAGCTGGAGAGATTGAACTTGCTATCTTTTGTTTACTTGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1503 0.3693 MMASQKHLHELLKEDQEPFLLNSYISQKRNQLKRPSPNTTLQLKKQKPPPTKTINLCKNACFFSFQNTPDIRKSPIFEYSSPAKSPIRIPAKTASLLLEAALKIQSKNKNKSFGVFGSFFKKLTQRNRNKKSENEENVSVKDILRWDSSIGRKNRKSFNNIVEVEEENRGFEVCSCNGRPSCSGVWSESNEDKSLDMETSSSGHSCESVEEVEFVMMKKKENGECDCFDQHGFFCESPFRFTLERSVSSSSGRCTPEFSSPVDSPSRHQTEDKENNGVDGVNKFQSVEDEEEKEQFSPVSVLDPLFEDYDDDDCHENDDEVGDFDLECSYANVQKSKQLLLERLRRFEQLAELDPLELEKRMQEDNEYEDDDNEEDECEASCEEKALREIVCEILCHPSVHERWQDQKVLKRLVYDLIKEEEKELNFSQDMDIVMKRVCKKMELWKQVESNTIDMMIEEDFSREEFGWKKNAEETKELAGEIELAIFCLLVDEFSEELVC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3244 500 MobiDBLite consensus disorder prediction 249 265 - -
Mal1g3244 500 PANTHER - 4 500 - -
Mal1g3244 500 MobiDBLite consensus disorder prediction 249 280 - -
Mal1g3244 500 MobiDBLite consensus disorder prediction 29 49 - -
Mal1g3244 500 MobiDBLite consensus disorder prediction 266 280 - -
Mal1g3244 500 PANTHER OS04G0572500 PROTEIN 4 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3244 Mal-Chr1 52103793 52108573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3244 2 307 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.609 1.41e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3244 - - gmx:100814311 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3244 1 52103793 52108573 Mal1g3244 1 52103793 52108573 ECH
Mal3g4342 3 122869587 122872696 Mal1g3244 1 52103793 52108573 PCT