Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3241 ATGTTTTCCCGTAGTTGCGGAGGAAGCAGCGAGAAAGGTTCTTCTTCCACTACAACAGAAAAAACAGGTCGGCATCGGTTGTACCGCGGAGTGAGACGTAGAAGCAATGGTAAATATGTCTCTGAAATTCGAGAGCCGAAAAAGCCTAATAGGATTTGGTTAGGAACATTTCCTACACCAGAAATGGCAGCTATAGCATATGATGTTGCCGCTTTCGCTCTTAAGGGTAAAGATGCTGAACTTAATTTCCCTGATTCAGTTTCTTCATTCCCTGTTCCTGCTTCTTTGTCTGCTTCTGATATCCAAATTGCAGCTGCTAGTGCTGCAGCTGCTGCTGGTGCAGCAAAAGATGCTTTGTGTGGTGATGATAAGAAAGAAGAGAGCCAAATAGGGATTAATGTATTTTCAGGTGCACAAGATTTTGTTGATGAGGATTTGATATTTGATATGCCTAATGTTTTGGTTAATATGGCTGAAGGAATGTTGCTAAGTCCACCTCCTTTTGATATTGGTGGAGAGGTTGATTACCATGAAAACATGGACAATGAAGAGACAAGCTTGTGGAATTTCCCTTAA 576 0.4167 MFSRSCGGSSEKGSSSTTTEKTGRHRLYRGVRRRSNGKYVSEIREPKKPNRIWLGTFPTPEMAAIAYDVAAFALKGKDAELNFPDSVSSFPVPASLSASDIQIAAASAAAAAGAAKDALCGDDKKEESQIGINVFSGAQDFVDEDLIFDMPNVLVNMAEGMLLSPPPFDIGGEVDYHENMDNEETSLWNFP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3241 191 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Mal1g3241 191 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 11 191 - -
Mal1g3241 191 CDD AP2 28 86 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 191 - -
Mal1g3241 191 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g3241 191 MobiDBLite consensus disorder prediction 1 17 - -
Mal1g3241 191 Pfam AP2 domain 28 76 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Mal1g3241 191 Gene3D AP2/ERF domain 27 85 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3241 Mal-Chr1 51886323 51886898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3241 17 191 AP2-EREBP Transcription Factor Family AT2G36450 60.000 4.03e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g3241 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3241 - - pvu:PHAVU_007G222600g 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4337 3 122847644 122848264 Mal1g3241 1 51886323 51886898 PCT