Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3238 ATGAAGATGAAGATAATAAAATACTGTGTCTCTGGAAGTGCAACACGTGTGTGTGCCACTCTCCCTCACACAAAATATCCATGTAACATAACAAGAAGACCATTATCTCTGTCTCTCATATCCACCACTTTCTCTGCTTTAATCTTCTCACTTCCTCCTCCACCTTCCTCTTCTTCTCCTTCACCTTCTTCAAAACTTCCAATAGCAGATTTCTCAGAACTCCCCAATTCAGGTGGTGTTAAGGCTTTGGAACTCCTTGTTGGTTCTGGTGAAGTTCCTCAAGATGGAGACCAGGTTGAGATTCATTACTATGGTAGACTAGCAGCAAAACAAGGATGGCGTTTTGATTCAACCTATGACCACAAAGATGAGAATGGTGATCCTAATCCTTTTGTCTTTGTCCTTGGCTCTGGTAAGGTAATTACTGGAATTGATGTGGCAGTGAGATCAATGAAAGTAGGTGGGATTCGTAGAGTCATTATACCTCCATCACTTGGGTATCAGAACACATCACAAGAACCTATACCACCTAATTTCTTTGACAGGCAGAGGCTGTTCACTACCATTTTTAATCCAACTCGACTTGCAAATGGCGAAGGTTCCACTTTAGGGACACTTATATTTGATATTGAACTGGTTGGCCTGAGGCATCAGTGA 657 0.4186 MKMKIIKYCVSGSATRVCATLPHTKYPCNITRRPLSLSLISTTFSALIFSLPPPPSSSSPSPSSKLPIADFSELPNSGGVKALELLVGSGEVPQDGDQVEIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVITGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVGLRHQ* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3238 218 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 92 213 IPR001179 GO:0003755
Mal1g3238 218 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 96 216 IPR001179 GO:0003755
Mal1g3238 218 SUPERFAMILY FKBP-like 74 216 - -
Mal1g3238 218 Gene3D - 68 215 IPR046357 GO:0003755
Mal1g3238 218 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 13 218 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3238 Mal-Chr1 51749479 51752360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3238 55 216 Calmodulin-binding Proteins AT5G48570 32.515 3.96e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3238 - - gmx:100808927 353.599