Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3232 ATGTTTGCTCTTTTTCTGAAAAATCTCTCCTTTCTCCCTTCTTCTTTTTCATCATCGCAAGTTCGCAAGCTTTTTAATAGGTTTCAAGTGTGTGAGTTCTCATCATCATCATCATCATCATCATCTCCTTGTCCTCCTCCGCAACCTCCTGAGGTTTCAGTATGGTGGCACCTTGACAGCTGTCCTGTGCCTTCTGGGGTTAGCTTTTCGAAGGTAGCACCTTCAATTATGGCAGCCGTTAGAGCTAACGGGATTATGGGTAGAATTCATATTCGCGCTTATGGTGATTTTAATTCTTCAGAGGTCGACAAAGAGGCTCTTCATTCAACCAACATTACTCTAATCTCCTTTACCGATTCTCTTTTTTTCAATAAAAAAATAGATACAGCTGGAAAGAACAATGCCTATAAGCATTTTCTTTTGGATCTTAATGATTGGGTTTCAGAAAATCCTCCACCCGCACACCTCTTTTTGATATTTGGTAATGGAGATTTCTCCAGCAATGGCCTATTGCAACGATTAAGAATGTGCAACTACAATATCTTGCTTGCATGTCCAGGAAGTGCTCATGTTGCTCTCTGCCATGCAGCAACTATAATGTGGGAGTGGTCTTCGATGCTCAAGGAGGAAGACCTTACAGGAAAACATTTCAACTATCCTCCTGATGGGCCGTTTAATTCGTGGTATGGAAACTCAAATGTGCCTCTTGAAAACCCCTTCTCAGTTGCTGAGTTGCAGACATCTTCGCAAAATGCGGAGATCTACAAACCTTCCTTGGACATAAAGTTAGGTGAAAATATTGTGAAAATAATGTGTTTGCACCCAAATGGGATCTCTATGGGAGATCTTCGTGCAGAGTTGACAAAGTGTGATCTGCCTTTGGGTAAACGCTTCTATGGTTATAAAAAGTTTTCCAACTTTCTAGTATCTATACCAGTACCACAATTACAACTCGAGTATTTAGGAGGAGGAAATTTTTGGGTGCGTTTGGTCCCATCCACAACATCTGCTGTTAAGAATAAGCAGATCGATGGTGCCGCAACTCAAAAGCTGCAAAATGAGGGTAAAAATATGGATAGAAGTGCAGGCGAGATTCCCAGAACATCCTCATCGTGTGTTAGCAGCGAGGGCGATGATTTAAAATCATTCAAATCTAACAATGACATTGTTAAGTCCGATGATGTAAGTCCTGAAATTCTGGAAAAAATAAACCCTTCACAGAATCCCTATACTTGTTATGATTGCACCATGTTGAAAAACAATGATATTGCAAATATTGAATCCGGAAAAGTAGAGAACAAACATGAGATTCCAACTAGAAAGGAGGTTGATGATGTTTGCCGCAGCCCATTTACTTCAACTTTCTTTAGTAGGATTAGTAGTTGGTGGAGAAAGCTTAAGTTATTTAAGGATTCAAAGTTATCTGAAGTAGACCAGAGTGCTAGTCATCCTCCGCGGACTCATTGGGATAACTTTAGGGTTTCGGTATGGTGGGACTTTGACAACTGTGGCGTCCCTTCCGACTTTAGCCTTTTAAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGAATTAAGGGCCCTATTCATATTAACGCTTATGGCGATGTTTCTCAACTTTCAGAGATCAAACAAGAAGCACTTTTCTTATCCGGTGTTGATCTCCACCACATTCCAGGTGGAAAGAACAAGAACAAATGCTTTATGGATTGGCTTTCTCGAAATCCCTCACCCGGACACCTCTTTTTGATATCTGGTGATAAAGACTTTGACTTCTCCAGCATGTTGCATCGGACCTGGTGGAGGAGGAACGACAACTTCTTGCTTGCATGTCCAGGAAAGCCTCATGGTTCTGTCTGCAAAGTAGCAACTATAGTGTGGCAGTGGTCTTCAGTGCTCAAGGGGAAATATCTTACTGGAAAATATATCAAGCCTCCTCCTGATTGGTATATTAAGGAGCGGGTGCGAGTGCCTCTTGAATATCCTCCCGGGTGGTATAGAAACTCGAAGACGCCTCATGAAAACCCCTTCTCAGCTACCGAGGAGCCCACATCTTCACAAAATGCAGAGATCCACGGACCTTCCTCGTACATAAAGTTATTAGAAGTTAAAAAGTCGGTTTCTAGGCAGGTTAGGAAGGTATTGAGTTCATACCCGAATGGGATCTCCATTGGAGATCTTAATTTACAGTTGAGAGTGATTTTTGCTGGAGGCGTATGTGGATGTAAAAAGTTTCCCGACATTCTAGTATCTATACCACATGTACAACTCTTGTATATAGGAGATTATAATTTTTGTGTACGTTTGATCCCATCAACAACATCTAATGTTAAGAAGAAGCAGTGGGCTGTTAAGAATGAGCAGAGGGATGTCAATCATTCAGGAACGCCTGTGTTATTTTCTACTAATTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACGTCTAGAGGATCACGTCTTCTTTCCCGGTCAAGAAGCAGGGAGGATCTGGCTCATAGATTACAAAAGCATGGATCCCTGTTTTTTATGTCTCTCACTGAAAATAAAATCCTTCAACTGGTGGAATTGTTGATAGCGGAGAAGAAATGGTTGGAGGAAAGCCCCTCGCAAGCATTTCCTTTTAGGATAACTAAACCTGTTAAGAGTTAA 2658 0.4131 MFALFLKNLSFLPSSFSSSQVRKLFNRFQVCEFSSSSSSSSSPCPPPQPPEVSVWWHLDSCPVPSGVSFSKVAPSIMAAVRANGIMGRIHIRAYGDFNSSEVDKEALHSTNITLISFTDSLFFNKKIDTAGKNNAYKHFLLDLNDWVSENPPPAHLFLIFGNGDFSSNGLLQRLRMCNYNILLACPGSAHVALCHAATIMWEWSSMLKEEDLTGKHFNYPPDGPFNSWYGNSNVPLENPFSVAELQTSSQNAEIYKPSLDIKLGENIVKIMCLHPNGISMGDLRAELTKCDLPLGKRFYGYKKFSNFLVSIPVPQLQLEYLGGGNFWVRLVPSTTSAVKNKQIDGAATQKLQNEGKNMDRSAGEIPRTSSSCVSSEGDDLKSFKSNNDIVKSDDVSPEILEKINPSQNPYTCYDCTMLKNNDIANIESGKVENKHEIPTRKEVDDVCRSPFTSTFFSRISSWWRKLKLFKDSKLSEVDQSASHPPRTHWDNFRVSVWWDFDNCGVPSDFSLLNVAPSIMGVLRANGIKGPIHINAYGDVSQLSEIKQEALFLSGVDLHHIPGGKNKNKCFMDWLSRNPSPGHLFLISGDKDFDFSSMLHRTWWRRNDNFLLACPGKPHGSVCKVATIVWQWSSVLKGKYLTGKYIKPPPDWYIKERVRVPLEYPPGWYRNSKTPHENPFSATEEPTSSQNAEIHGPSSYIKLLEVKKSVSRQVRKVLSSYPNGISIGDLNLQLRVIFAGGVCGCKKFPDILVSIPHVQLLYIGDYNFCVRLIPSTTSNVKKKQWAVKNEQRDVNHSGTPVLFSTNSFWDDVESFVFTSRGSRLLSRSRSREDLAHRLQKHGSLFFMSLTENKILQLVELLIAEKKWLEESPSQAFPFRITKPVKS* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3232 885 PANTHER EMB|CAB71880.1 482 794 - -
Mal1g3232 885 PANTHER EMB|CAB71880.1 787 884 - -
Mal1g3232 885 PANTHER EMB|CAB71880.1 12 474 - -
Mal1g3232 885 MobiDBLite consensus disorder prediction 363 379 - -
Mal1g3232 885 CDD PIN_limkain_b1_N_like 52 186 - -
Mal1g3232 885 PANTHER LIMKAIN B LKAP 482 794 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3232 885 PANTHER LIMKAIN B LKAP 787 884 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3232 885 PANTHER LIMKAIN B LKAP 12 474 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3232 885 Pfam OST-HTH/LOTUS domain 265 312 IPR025605 -
Mal1g3232 885 ProSiteProfiles OST-type HTH domain profile. 259 332 IPR025605 -
Mal1g3232 885 MobiDBLite consensus disorder prediction 353 379 - -
Mal1g3232 885 Pfam NYN domain 52 197 IPR021139 GO:0004540
Mal1g3232 885 Pfam NYN domain 493 593 IPR021139 GO:0004540
Mal1g3232 885 CDD PIN_limkain_b1_N_like 493 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3232 Mal-Chr1 51431250 51441201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3232 493 637 C2H2 Transcription Factor Family AT5G61190 37.748 1.66e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3232 - - mtr:MTR_7g077430 1058.51