Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3215 ATGGGCGATGTTAGTGCTATAAAGACCAACAATAGAATAAGTTTTTATTTGAATGAAAGTCTAATAGAAGATATTGCTTTAGAAAATGGTTGTTCAGAAATAATTGTTGGGCATGATTTAGTGAAGGAATTGTTAGTAGTTGATAACATAGGAAGTTCTGAGAAAGATAGCTCTGCTTCATGTTTTAATATTGTAACAAATGAAGAAGGTGATAAAGATGGGTCTAGTAATGAGACAAATTGCGTTCCCTTTGTTGGTCAAATTTTTATTAGTGAAGAAGAAGCATTTGTCTTTTATAAGAAATATGCTTATCAACAAGGTTTCTCAATAAAAAAAGGTAGATTCACAAACAAAAATGAGGTTATCAGCAGACGTGATTTTTTTTGCCTTCGTGAAGATCAGAGAAATAGAGAATCATCAAAGTGTGATTGCAAAGCTCATTTACGAATTAAATTGCAAAAGTCTCATGATATATTTCAACCTGAGTGGCGAGTTACAACATTTGTTGTTGAACATAACCATGGTTTGCTAACCCCATCAGAGGTGCGTTTCTTACCGGCTTATCGAACTATCTTAGAAGATGATCGTGAACATATTTTCTTATTAAAAGAAGGTGGACTTTCAGTTAGACAAATAATGCGTGTTATAGAATTAGAGAAAAATGTGAAGCATGATTATCTTCCATTTATTGAAAGGGACATTCGTAATCTTTTTGTGAAAGCTAACAAAAAAGTGGAAATAAGTGATGTCATGTATCTTTTGAAGTATTGCGAGGATGCAAAAGAAACTTGCTCTAAATTTCAATATGCATATACACTTGATGAAGAAAGAAGGTTAGAGCATATTTTTTGGTCCTCAGCTTCTTGTTTTGATTGGTACCAACAATATGGCGATGTTGTTGTATTTGATACTACATACAAGGTCAATTCTTATGAAATGCCATTTGCAATTTTTGTGGGTATGAATAATCATGGAAAGACCGTGCTTTTTGGATGTGCACTCTTACGGAACGAAATTGTGTCTGCATTTCGTTGGCTAATGAAGACTTTTATATCTTTGATGAAGAAGTCGTCACCGAAGAATATATTAACCGATCAAGATCCATGGATGAAAGAAGCAATCTCAAAAGAATTGTCATCAACAAAACACAATTTCTGCATATGGCACATAACTTTTAAGTTTAGTTCTTGGTTTAATGCTATACTTCGAGACAAATATGAAAAATGGTGTTCTGATTTTTATGAGTTGTATAAGTTGGAGACACGTGAAGAATTTGAGCATCAATGGCCAAAAGTTGTTGCTAAGTATAACTTGCAGTCAAATAAACATGTGAAAGGATTGTATGAAATCAGAAACTATTGGGCACTTGCTTATCTTCGTGATTATTTCTTTGGTGGGATGACAACCACCGGAAGATCGGAGAGTATTAATGCATTCATTAAAAGATTCATCAATTCTCACACAAATTTAACCGACTTTGCAAAACAGGTTGATGTAGCAATTGATGATATTAAGCAAAAAGAAGAGCATGATATAATGTTAGAGAAGTGCAAAGGATCAAATGTGAAGTTGATGTCACCTTTACAAGAGCAAGCTCATAGTGTTCTCACTCGTTTTTCTTTTCAAAAGTTTCAAGAGGAGTTTGAAAGGTCCGCTCAATATTCAATTGATCATGAAAATGGTAATGTGTTTGTGCTTCGGTATTATAAAGAGGTTAATAGCAGGAAACATGTAGTCTTTTGGGATGGTAAGGTAGCTACATGTAGTTGTAAGCTCTTTGAATTTTGGGGGATATTGTGTCGCCACATTCTTAGTATTTTTCTTCATAAAGATTGTCACGAAATCCCTTCTAACTACTTTCTATCACGGTGGTTGCTTCAAGCATCATTTGATGATAACGAAGAGGAGTCACAAGTTAATGTTGTCATTGATGAGCAAGTAATAGATTGTGACAATGAAGCTCATTCACAACATGTTGTTCATTGTCCTCCAAAATCCAAACCTAAAGGTCGTCCTAAACGACGACGGCTTAAAGGTGGAAAAGAGCTATCACATAACATGAATACTTGTGGATTATGCAAAGGTGAAGGACATAACATTGTCACATGTCCTCTAAAGGAAAAGAAGAAGGCAAACAAGAAGAAGAAAATTTGTGAAGATGCAAATTTAAATCCAATAAAAAAAGGTAAATACACATAA 2199 0.3406 MGDVSAIKTNNRISFYLNESLIEDIALENGCSEIIVGHDLVKELLVVDNIGSSEKDSSASCFNIVTNEEGDKDGSSNETNCVPFVGQIFISEEEAFVFYKKYAYQQGFSIKKGRFTNKNEVISRRDFFCLREDQRNRESSKCDCKAHLRIKLQKSHDIFQPEWRVTTFVVEHNHGLLTPSEVRFLPAYRTILEDDREHIFLLKEGGLSVRQIMRVIELEKNVKHDYLPFIERDIRNLFVKANKKVEISDVMYLLKYCEDAKETCSKFQYAYTLDEERRLEHIFWSSASCFDWYQQYGDVVVFDTTYKVNSYEMPFAIFVGMNNHGKTVLFGCALLRNEIVSAFRWLMKTFISLMKKSSPKNILTDQDPWMKEAISKELSSTKHNFCIWHITFKFSSWFNAILRDKYEKWCSDFYELYKLETREEFEHQWPKVVAKYNLQSNKHVKGLYEIRNYWALAYLRDYFFGGMTTTGRSESINAFIKRFINSHTNLTDFAKQVDVAIDDIKQKEEHDIMLEKCKGSNVKLMSPLQEQAHSVLTRFSFQKFQEEFERSAQYSIDHENGNVFVLRYYKEVNSRKHVVFWDGKVATCSCKLFEFWGILCRHILSIFLHKDCHEIPSNYFLSRWLLQASFDDNEEESQVNVVIDEQVIDCDNEAHSQHVVHCPPKSKPKGRPKRRRLKGGKELSHNMNTCGLCKGEGHNIVTCPLKEKKKANKKKKICEDANLNPIKKGKYT* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3215 732 Pfam MULE transposase domain 299 391 IPR018289 -
Mal1g3215 732 SMART 26again6 586 613 IPR006564 GO:0008270
Mal1g3215 732 MobiDBLite consensus disorder prediction 662 680 - -
Mal1g3215 732 Pfam FAR1 DNA-binding domain 98 177 IPR004330 -
Mal1g3215 732 MobiDBLite consensus disorder prediction 658 680 - -
Mal1g3215 732 Pfam SWIM zinc finger 578 610 IPR007527 GO:0008270
Mal1g3215 732 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 51 625 - -
Mal1g3215 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 625 IPR031052 GO:0006355
Mal1g3215 732 ProSiteProfiles Zinc finger SWIM-type profile. 568 611 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3215 Mal-Chr1 49904512 49906922 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g3215 MULE 4.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3215 - - gsj:114409893 1117.83