Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3213 ATGTTTCCTCTTTTTCTGAAAAATCTCTCCTTTCTCCCTTCTTCTTTTTCATCATCGCAAGTTCGCAAGCTTTTTACTAGGTTTCAAGTGTGTGAGTTCTCATCATCATCATCATCATCATCATCTCCTTGTCCTCCTCCGCAACCTCCTGAGGTTTCAGTATGGTGGCACCTTGACAGCTGTCCTGTGCCTTCTGGGGTTAGCTTTTCGAAGGTAGCACCTTCAATTATGGCAGCCGTTAGAGCTAACGGGATTATGGGTAGAATTCATATTCGCGCTTATGGTGATTTTAATTCTTCAGAGGTCGACAAAGAGGCTCTTCATTCAACCAACATTACTCTAATCTCCTTTACCGATTCTCTTTTTTTCAATAAAAAAATAGATACAGCTGGAAAGAACAATGCCTATAAGCATTTTCTTTTGGATCTTAATGATTGGGTTTCAGCAAATCCTCCACCCGTACACCTCTTTTTGATATTTGGTAATGGAGATTTCTCCAGCAATGGCCTATTGCAACGATTAAGAATGTGCAACTACAATATCTTGCTTGCATGTCCAGGAAGTGCTCATGTTGCTCTCTGCCATGCAGCAACTATAATGTGGGAGTGGTCTTTGATGCTCAAGGAGGAAGACCTTACAGGAAAACATTTCAACTATCCTCCTGATGGGCCGTTTAATTCGTGGTATGGAAACTCAAATGTGCCTCTTGAAAACCCCTTCTCAGTTGCTGAGTTGCAGACATCTTCGCAAAATGCGGAGATCTACAAACCTTCCTTGGACATAAAGTTAGGTGAAAATATTGTGAAAATATTGTGTTTGCACCCAAATGGGATCTCTATGGGAGATCTTCGTGCAGAGTTGACAAAGTGTGATCTGCCTTTGGGTAAACGCTTCTATGGTTATAAAAAGTTTTCCAACTTTCTAGTATCTATACCAGTACCACAATTACAACTCGAGTATTTAGGAGGAGGAAATTTTTGGGTGCGTTTGGTCCCATCCACAACATCTGCTGTTAAGAATAAGCAGATCGATGGTGCCGCAACTCAAAAGCTACAAAATGAGGGTAAAAATATGGATAGAAGTGCAGACGAGATTCCCCGAACATCCTCATCGTGTGTTAGCAGCGAGGGCGATGATGTAAGTCCTGAAATTCTGGAAAAAATAAACCCTTCACAGAATCCCTATACTTGTTATGATTGCACCATGTTGAAAAACAATGATATTGCAAATCTTGAATCCGGAAAAGTAGAGAAGAAACATGAGATTCCAACTAGAAATGAGGTTGATGATGTTTGCCGCAGCCCATTTACTTCAACTTTCTTTAGTAGGATTAGTAGTTGGTGGAGAAAGCTTAAGTTATTTAAGGATTCAAAGTTATCTGAAGTAGACCAGAGTGCTAGTCATCCTCCGCGGCCTCATTGGGATAACTTTAGGGTTTCGGTATGGTGGGACTTTGACAACTGTGGCGTCCCTTCCGACTTTAGCTTTTTAAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGAATTAAGGGCCCTATTCATATTAACGCTTATGGCGATGTTTCTCAACTTTCAGAGATCAAACAAGAAGCACTTTTCTTATCCGGTGTTGATCTCCACCACATTCCAGGTGGAAAGAACAAGAACAAATGCTTTATGGATTGGCTTTCTCGAAATCCCTCACCCGGACACCTCTTTTTGATATCTGGTGATAAAGACTTTGACTTCTCCAGCATGTTGCATCGGACCTGGTGGAGGAGGAACGACAACTTCTTGCTTGCATGTCCAGGAAAGCCTCATGGTTCTGTCTGCAAAGTAGCAACTATAGTGTGGCAGTGGTCTTCAGTGCTCAAGGGGAAATATCTTACTGGAAAATATATCAAGCCTCCTCCTGATTGGTATATTAAGGAGCGGGTGCGAGTGCCTCTTGAATATCCTCCCGGGTGGTATAGAAACTCGAAGACGCCTCATGAAAACCCCTTCTCAGCTACTGAGGAGCCCACATCTTCACAAAATGCAGAGATCCACGGACCTTCCTCGTACATAAAGTTATTAGAAGTTAAAAAGTCGGTTTCTAGGCAGGTTAGGAAGGTATTGAGTTCATACCCGAATGGGATCTCCATTGGAGATCTTAATTTACAGTTGAGAGTGATTTTTGCTGGAGGCTTATGTGGATGTAAAAAGTTTCCCGACATTCTAGTATCTATACCACATGTACAACTCTTGTATATAGGAGATGATAATTTTTGTGTACGTTTGATCCCATCAACAACATCTAATGTTAAGAAGCAGTGGGCTGTTAAGAATGAGCAGAGGGATGTCAATCATTCAGGAATGCCTGTGTTATTTTCTACTAATTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACGTCTAGAGGATCACGTCTTCTTTCCCGGTCAAGAAGCAGGGAGGATCTGGCTCATAGATTACAAAAGCATGGATCCCTGTTTTTTATGTCTCTCACTGAAAATAAAATCCTTCAACTGGTGGAATTGTTGATAGCGGAGAAGAAATGGTTGGAGGAAAGCCCCTCGCAAGCATTTCCTTTTAGGATAACTAAACCTGTTAAGAGTTAA 2610 0.4146 MFPLFLKNLSFLPSSFSSSQVRKLFTRFQVCEFSSSSSSSSSPCPPPQPPEVSVWWHLDSCPVPSGVSFSKVAPSIMAAVRANGIMGRIHIRAYGDFNSSEVDKEALHSTNITLISFTDSLFFNKKIDTAGKNNAYKHFLLDLNDWVSANPPPVHLFLIFGNGDFSSNGLLQRLRMCNYNILLACPGSAHVALCHAATIMWEWSLMLKEEDLTGKHFNYPPDGPFNSWYGNSNVPLENPFSVAELQTSSQNAEIYKPSLDIKLGENIVKILCLHPNGISMGDLRAELTKCDLPLGKRFYGYKKFSNFLVSIPVPQLQLEYLGGGNFWVRLVPSTTSAVKNKQIDGAATQKLQNEGKNMDRSADEIPRTSSSCVSSEGDDVSPEILEKINPSQNPYTCYDCTMLKNNDIANLESGKVEKKHEIPTRNEVDDVCRSPFTSTFFSRISSWWRKLKLFKDSKLSEVDQSASHPPRPHWDNFRVSVWWDFDNCGVPSDFSFLNVAPSIMGVLRANGIKGPIHINAYGDVSQLSEIKQEALFLSGVDLHHIPGGKNKNKCFMDWLSRNPSPGHLFLISGDKDFDFSSMLHRTWWRRNDNFLLACPGKPHGSVCKVATIVWQWSSVLKGKYLTGKYIKPPPDWYIKERVRVPLEYPPGWYRNSKTPHENPFSATEEPTSSQNAEIHGPSSYIKLLEVKKSVSRQVRKVLSSYPNGISIGDLNLQLRVIFAGGLCGCKKFPDILVSIPHVQLLYIGDDNFCVRLIPSTTSNVKKQWAVKNEQRDVNHSGMPVLFSTNSFWDDVESFVFTSRGSRLLSRSRSREDLAHRLQKHGSLFFMSLTENKILQLVELLIAEKKWLEESPSQAFPFRITKPVKS* 870
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3213 869 PANTHER EMB|CAB71880.1 474 778 - -
Mal1g3213 869 MobiDBLite consensus disorder prediction 352 377 - -
Mal1g3213 869 Pfam OST-HTH/LOTUS domain 265 312 IPR025605 -
Mal1g3213 869 Pfam OST-HTH/LOTUS domain 692 743 IPR025605 -
Mal1g3213 869 ProSiteProfiles OST-type HTH domain profile. 259 332 IPR025605 -
Mal1g3213 869 CDD PIN_limkain_b1_N_like 52 186 - -
Mal1g3213 869 Pfam NYN domain 52 197 IPR021139 GO:0004540
Mal1g3213 869 Pfam NYN domain 478 578 IPR021139 GO:0004540
Mal1g3213 869 PANTHER LIMKAIN B LKAP 12 379 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3213 869 PANTHER LIMKAIN B LKAP 771 868 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3213 869 PANTHER EMB|CAB71880.1 12 379 - -
Mal1g3213 869 PANTHER EMB|CAB71880.1 771 868 - -
Mal1g3213 869 PANTHER LIMKAIN B LKAP 474 778 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal1g3213 869 CDD PIN_limkain_b1_N_like 478 599 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal1g3213 Mal-Chr1 49874534 49882795 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3213 478 622 C2H2 Transcription Factor Family AT5G61190 37.748 2.11e-20 95.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3213 - - mtr:MTR_7g077430 686.026