Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3203 ATGGAACAAACCATGCACAACAACAACAATGTTTCTCTTGGTTCACCACAACAAGTAGTGACAACAAACACATTACCTCAAGAAATGAACATGAACATAAGTGCTGAAAACAGTGTTGTCACTACTACTGCAACATCAATGGTTCCTGCAGTAACACCAACAGTCACAACAACACCAACAACAACACCAGGAAGTTTAGATTTGTTTGGTAAAAAGAAAAGAGGTAGACCAAGAAAATATGATGCTGATGGAAACCTAAATCCAAATTACAAAAAAATTGCAAAAACACCAACACCAATACTAACACCACCACCAGGATTCACTTTGTCTACAAATGAGTTTGTGTCCAAAAAGGGTCGTGGTAAATCAACCGGGTTTGGAAATTACCAAACCCTTTCTTCTTTTGGTGAGGTGTTTCCAAGCACAGCTGCTGTGGATTTTACAGCACATGTAGTCACAGTTTATGCAGGAGAGGATGTTGGTGGAAAGATCTTGTCATTTGCACAGAAGAGTCCAAGAGGAATTTGCATTCTTTCTGCCAATGGAGCTATTTCGAAAGTTGCATTACGTCAACCTGGTTCTACTGGTGGTGGCATTTTGACTTATGAGGGTCGGTTTGAGATTCTATCTTTGTCTGGATCATATACGGTCTCGGACAATGGTGGCATAAGAACTCGAGAGGGTGGATTGAGTGTCTCGCTAGCTGGTCCTGACGGTCGAGTGATCGGAGGTGCTGTTGCTGGTCTTCTTACAGCTGCTGGCCCGATCCAAATTGTAGTGGGGAGCTTCATGCCAAATGGTAACAACAAGCCACTTAAAAGGAAGTACCAACGTGAACAAACAGTGGCTTCTCCAACTTCAACTGGTCCAGAAATAGTGACAGCACTGGCAGCAGCAAGACCTATCTCACAAGCAAATACTCATGGTGAAAACTTTATGATACCTATTATGACTCATCAGTTTCCTGATCAAATCCAGAGAGAATTTGTCGGTGTTTCAAGTGATAAACTGAACTTAGATGCCACTCCTGATGATGCTACTTGGAACAGCTCTGATGAATATTCAGATCAAAGGACATCCCCTGACATCAATATTTCATTGCCTGATGAATAG 1113 0.4196 MEQTMHNNNNVSLGSPQQVVTTNTLPQEMNMNISAENSVVTTTATSMVPAVTPTVTTTPTTTPGSLDLFGKKKRGRPRKYDADGNLNPNYKKIAKTPTPILTPPPGFTLSTNEFVSKKGRGKSTGFGNYQTLSSFGEVFPSTAAVDFTAHVVTVYAGEDVGGKILSFAQKSPRGICILSANGAISKVALRQPGSTGGGILTYEGRFEILSLSGSYTVSDNGGIRTREGGLSVSLAGPDGRVIGGAVAGLLTAAGPIQIVVGSFMPNGNNKPLKRKYQREQTVASPTSTGPEIVTALAAARPISQANTHGENFMIPIMTHQFPDQIQREFVGVSSDKLNLDATPDDATWNSSDEYSDQRTSPDINISLPDE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3203 370 Gene3D - 148 284 - -
Mal1g3203 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 369 IPR039605 GO:0003680
Mal1g3203 370 MobiDBLite consensus disorder prediction 343 364 - -
Mal1g3203 370 MobiDBLite consensus disorder prediction 339 370 - -
Mal1g3203 370 ProSiteProfiles PPC domain profile profile. 144 288 IPR005175 -
Mal1g3203 370 CDD DUF296 150 263 IPR005175 -
Mal1g3203 370 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 263 IPR005175 -
Mal1g3203 370 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 4 369 - -
Mal1g3203 370 MobiDBLite consensus disorder prediction 53 107 - -
Mal1g3203 370 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3203 Mal-Chr1 49382823 49386478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3203 71 308 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 48.780 1.18e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3203 - - gmx:100779227 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3203 1 49382823 49386478 Mal1g3203 1 49382823 49386478 ECH