Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3198 ATGGCCTCTTGCGACGACGACGACGATTTCTCTCTCCTCCACGACGATACCAACCACCACCACTCTCACCACCACCTCCACCAAACCTTCGCACCTCACCACCACCACCACAACCACCACCATTTCTCCACCGCTTCAGTCCAATCTAAACACGTCTCCTCCGCCGTCGCCGACGACGAAGATGATGCCGACGATTACGGAAATCCATTCGACGATGACGCCGGTAGCGAGAAACGTAAAGATCGAGATCGAGATGAGATCTGTGATGCAACGACGTCGTATGGATTCAACAACAAACGGTCAAAACCAGTTTCAAGCGGAAACGGAGGTAACGGTGGAGGAGGAGGAAGCGGAGGAGTAGGAGCAGAGTATAGGAAGGATCGAGAAGAATGGAGTGATACAGCGATAGTGTGTTTACTCGAAGCTTATACGGAGAAATTTACGCAGCTGAATCGAGGGAATCTAAGAGGAAGAGATTGGGAGGAAGTAGCTTCTATGGTGAGTGAAAGGTGTGAGAATCAATCCAAGAGTGTGGAACAGTGTAAGAACAAGGTTGATAATTTGAAGAAACGGTATAAGCTTGAGAGGCATAGAATGAATAATGGTTGTATTTCTGCTAGTCATTGGCCTTGGTTTAAGCAGATGGAACATATTGTTGGAAATTCGCTTCCGGCGAAGTTTGCTGATGAGGATAAAGCTATTGTTCCTGCTTCCAATTCACCGAGGCAATCTAAGAGATATGGAGTGGCAACGTCCAGCAGTGGGGGTCAAGTAAACAGCCTGAAGTCCAAAGCATTGCCAAACCTTAGATGGCGGAGAGTTGTTCTAAAAATTAGCGGATCAGCACTTACCGGATCCGATACCTGCAATCTTGACCCTAAGGTGGCCATGTTAGTTTCAAGTGAAGTTGCAATAGCTTCCCGCCTTGGTGTGGAGGTAGCAATTGTTGTTGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTAATGAACTCATTACTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTTCAATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGGATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACCGATATAGCTGCTGCTCTTCGGGCTTCAGAGGTTAATGCTCAGGCAGTCCTCAAAGGTACTAACGTAGATGGTGTCTATGACTGTAACTCCCGAGACAACAATTTCACTTTCGAGCACATATCCTTCAGGGAGCTAGTCTCTAGAGGTGTCACCTCTATGGATATGTCAGCCCTGACATTCTGTGAGGAAAATGCCATTCCGGTTGTGGTTTTTAATCTATTGGCACCCGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTAATTGACCAAAATGGAGCAATAAGCTAA 1533 0.4644 MASCDDDDDFSLLHDDTNHHHSHHHLHQTFAPHHHHHNHHHFSTASVQSKHVSSAVADDEDDADDYGNPFDDDAGSEKRKDRDRDEICDATTSYGFNNKRSKPVSSGNGGNGGGGGSGGVGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASMVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISASHWPWFKQMEHIVGNSLPAKFADEDKAIVPASNSPRQSKRYGVATSSSGGQVNSLKSKALPNLRWRRVVLKISGSALTGSDTCNLDPKVAMLVSSEVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSTLEKMGVQTRVQTSVSMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIAAALRASEVNAQAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQNGAIS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3198 510 PANTHER URIDYLATE KINASE 1 510 - -
Mal1g3198 510 MobiDBLite consensus disorder prediction 71 89 - -
Mal1g3198 510 Gene3D - 266 504 IPR036393 -
Mal1g3198 510 MobiDBLite consensus disorder prediction 20 44 - -
Mal1g3198 510 MobiDBLite consensus disorder prediction 91 112 - -
Mal1g3198 510 SUPERFAMILY Carbamate kinase-like 270 503 IPR036393 -
Mal1g3198 510 Coils Coil 171 198 - -
Mal1g3198 510 Hamap Uridylate kinase [pyrH]. 269 504 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mal1g3198 510 Gene3D - 131 194 - -
Mal1g3198 510 Pfam Amino acid kinase family 273 483 IPR001048 -
Mal1g3198 510 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 1 510 IPR011817 GO:0006221|GO:0009041
Mal1g3198 510 CDD AAK_UMPK-PyrH-Ec 272 504 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mal1g3198 510 Pfam Myb/SANT-like DNA-binding domain 128 218 IPR044822 -
Mal1g3198 510 MobiDBLite consensus disorder prediction 18 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3198 Mal-Chr1 49222481 49227577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3198 105 222 Trihelix Transcription Factor Family AT3G14180 37.500 2.54e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g3198 AA_kinase 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3198 - - gmx:100805176 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3198 1 49222481 49227577 Mal1g3198 1 49222481 49227577 ECH