Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3196 ATGGAAGCTAATGGCATGTTTACCACCATCACCACTTCTGGTTTGCTAGGAGTAGTTGATAATGTCCAACAACAAAAGAATCTCCCTATTCAACAACAACAAAATCCTCACCATTTGCACCATTCCCAAGTTGTTTCCTATGCTCCCCAACATCATGACACTGACACAAATCAACAACATCATCATCATTCAATGAAACATGGTTACCCTCCTTTTTCATCATCTAAAAACAAGAATCAACATCAACAACAACAAAGTTCTCAAATGAGTGATGATGATGAACCAAATTTTCCAGCTGAAGAAAGCTCTGGTGACCCAAAGAAGAAGATTTCACCATGGCAAAGAATGAAATGGACTGATACAATGGTAAGGCTTTTGATAATGGCTGTTTATTACATTGGTGATGAAGCTGGTTCAGAAGGGACTGATCCAAATAAGAAAAAGTCTAGTGGTTTGTTACAGAAGAAGGGAAAGTGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTGTCACCTCAACAATGTGAAGATAAGTTCAATGATTTGAATAAAAGGTATAAGAGAGTGAATGATATACTTGGGAAAGGAACAGCTTGTAGAGTTGTTGAGAATCAGGGTTTGTTGGATTCAATGGATTTGTCACCAAAGATGAAAGATGAAGTTAGGAAATTGCTTAATTCTAAGCATCTTTTCTTTAGGGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGTGGTGGTGTTGGTGCTTCTTCTTCTAATGTTCAACATCAAGTGGAAGGTGGAACAACAACACCTCAAAATCAACCTCAACAACATCAACAGCAGCAGCAACAACAACATTGTTTTCATTCATCAGAGAATGGTGTTGGGAAACTAGGTGGTTCAAGAGGAGATGGTTTAAGGATGTTGAAAATTGGAAGTGTGGAAGGGGGAGAGGAGGAGGAGGATGATGATGAAGATGATGAGTCAGAGGACTATTCTGAAGAGGATGAAGATGAATCAGGAGAAGGATGTTCAAAGGGTCAAATTGGTCATTTAAATGATCAAGATGAAGAAGAGAATGATGGAAAATCATCAAGGAAAAGGGCAAGAAAAGGAGGATTTTCCTTTTCTAGGTCATCATCATCAACACAATTGATGAATCAAATGAACAATGAAATAAGTGGTGTATTTCAAGATGGAGGGAAGAGTCCTTGGGAGAAAAAGCAATGGATAAGGAACAGAATTTTGCAATTGGAGGAACAAAAAATAGGATATGAATCACAAGCATTTCAGCTTGAAAAGCAAAGGTTGAAATGGGTAAGGTATAGTAGCAAAAAGGAGAGGGAAATGGAGAGAGCTAAACTTGAGAATGAAAGGAGAAGATTAGAAAATGAGAGAATGGTTTTGCTTATTAGGAAGAAGGAGATTGAGTTGATGAATCTTCAACAGCAGCAGCAACAACAGCAACATTCTTCTACTTAG 1476 0.378 MEANGMFTTITTSGLLGVVDNVQQQKNLPIQQQQNPHHLHHSQVVSYAPQHHDTDTNQQHHHHSMKHGYPPFSSSKNKNQHQQQQSSQMSDDDEPNFPAEESSGDPKKKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPNKKKSSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQGLLDSMDLSPKMKDEVRKLLNSKHLFFREMCAYHNSCGHGGGVGASSSNVQHQVEGGTTTPQNQPQQHQQQQQQQHCFHSSENGVGKLGGSRGDGLRMLKIGSVEGGEEEEDDDEDDESEDYSEEDEDESGEGCSKGQIGHLNDQDEEENDGKSSRKRARKGGFSFSRSSSSTQLMNQMNNEISGVFQDGGKSPWEKKQWIRNRILQLEEQKIGYESQAFQLEKQRLKWVRYSSKKEREMERAKLENERRRLENERMVLLIRKKEIELMNLQQQQQQQQHSST* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3196 491 MobiDBLite consensus disorder prediction 349 366 - -
Mal1g3196 491 Coils Coil 413 433 - -
Mal1g3196 491 MobiDBLite consensus disorder prediction 314 339 - -
Mal1g3196 491 MobiDBLite consensus disorder prediction 51 113 - -
Mal1g3196 491 Gene3D - 118 191 - -
Mal1g3196 491 MobiDBLite consensus disorder prediction 252 289 - -
Mal1g3196 491 MobiDBLite consensus disorder prediction 70 93 - -
Mal1g3196 491 Coils Coil 441 489 - -
Mal1g3196 491 MobiDBLite consensus disorder prediction 252 381 - -
Mal1g3196 491 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 4 491 - -
Mal1g3196 491 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Mal1g3196 491 PANTHER F16F4.11 PROTEIN-RELATED 4 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3196 Mal-Chr1 49184714 49186189 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g3196 Myb_DNA-bind_4 5.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3196 - - cam:101509296 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3196 1 49184714 49186189 Mal1g3196 1 49184714 49186189 ECH
Mal3g4312 3 122489003 122490361 Mal1g3196 1 49184714 49186189 PCT