Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3165 ATGGATACAATGTTGGTTCCTAAATGGCTCAAACCACTTCTTAGCACACCTTTTTTCAATGTGTGTCGGATTCACGCCGACGCAGCAAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAATGTTGATGCCTTTTGCTTCTATTGTCGTTCTTCAAAACACAAGGATCATCAAGTCATTCAGATAAGGAGATCTTCATATCATGATGTAGTGAGGGTGGCTGAAATTCAGAAAATGTTGGACATTAGTGGAGTTCAAACATATGTGATCAATAGTGCTAGAGTTTTATTTCTGAATGAGAGGCCTCAACCAAAAACTGGAAAAGCTGTTCCTTACCTTTGTGAGATTTGTGGAAGAGGCCTTTTAGACCAAGTTCGTTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGAATGCAAGCTTTGTTTTAGATGCTAATAACAATGAGGTATCAACAATGGAGGAAGGAATGTCAAGACAAGAAGAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGGAATGTATCCTCCAACACCTCCTTCAAATGCAAGGAGAAGAAAAGGAATTCCTCATAGGGCACCTTTTGGACCCTAA 606 0.396 MDTMLVPKWLKPLLSTPFFNVCRIHADAARSECNMFCLDCNVDAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQKMLDISGVQTYVINSARVLFLNERPQPKTGKAVPYLCEICGRGLLDQVRFCSLGCKLVGIKRNGNASFVLDANNNEVSTMEEGMSRQEEEEELREGSQQGMYPPTPPSNARRRKGIPHRAPFGP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3165 201 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 200 - -
Mal1g3165 201 MobiDBLite consensus disorder prediction 159 173 - -
Mal1g3165 201 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 200 - -
Mal1g3165 201 SUPERFAMILY B-box zinc-binding domain 19 64 - -
Mal1g3165 201 Pfam PLATZ transcription factor 63 134 IPR006734 -
Mal1g3165 201 Coils Coil 147 167 - -
Mal1g3165 201 MobiDBLite consensus disorder prediction 156 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3165 Mal-Chr1 48889197 48890318 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal1g3165 PLATZ 3.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3165 - - gmx:100809455 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4286 3 122187093 122189308 Mal1g3165 1 48889197 48890318 PCT