Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3162 ATGGATGAGGAAAAGGTTCATATTAACATTGTGGTTATTGGTCACGTCAACTCTGGGAAGTCAACCACGGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGCAAAGAATGACATTGACATATTTGAGAAAGAAGCTGCTGAGGTAAATAAGCGTTCATTCAAGTATGCGTGGGTGCTTGACAAACTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGACATTTCTATGTGGAATTTTGAGACAACCAAGTACCGCTGCACTATCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATTACTGGGACATCCCAAGCTGATTGTGCTGTTCTTATCGTTGATTCCACTCCTGGTGGTTTTGGAGCCGGTATTTCCAAGAATGGCCAGACCCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTATGGATGCCATTAGACCCAAATACTTCAAGTATAGGTATGAAGAAATTGTGAAGCAACTTTCACCCTTTTTGAGCAAGATTGGCTATTACCTAGACAAAGTTCCATTTGTTCCCATATCTGGTTTTGAGGGAGATAACTTGATTGAGCGCTCTGCTAATCTTGGCTGGTGGTACAAGGGTCCCACCCTTCTTGAAGCTCTTGACCAAATCAACAAGCCTAAGAGGCTATCAAACAAGCCTCTCCGATTACCACTTCAGGATGTCTACAAGATTGGAGGAATTGGAACTGTCGCTGCGGGATGTGTTAGGACTGGTGTCTTGAAACCTGGAATGGTGGTGAGTTTTGCCCCAACTGGGCTGCAAGGTGAAGTGATGTCTGTGCAGATGGACCATGTATATCTCACCGAGGCCCTTCCTGGTGATAATGTGGGATTTAATGTTAAGAATGTGTCTGCTGCGCATCTCAGGCGAGGCTATGTTGCCTCAAATTCCAAGCATAAACCAGCCAAGGAAGCCACTAACTTTACATCTAAAGTTATCATTACGGATCACCCTGGCCGGATTGGAAATTGA 1005 0.4468 MDEEKVHINIVVIGHVNSGKSTTAGHLIYKLGGIAKNDIDIFEKEAAEVNKRSFKYAWVLDKLKAERERGITIDISMWNFETTKYRCTIIDAPGHRDFIKNMITGTSQADCAVLIVDSTPGGFGAGISKNGQTREHALLAFTLGMDAIRPKYFKYRYEEIVKQLSPFLSKIGYYLDKVPFVPISGFEGDNLIERSANLGWWYKGPTLLEALDQINKPKRLSNKPLRLPLQDVYKIGGIGTVAAGCVRTGVLKPGMVVSFAPTGLQGEVMSVQMDHVYLTEALPGDNVGFNVKNVSAAHLRRGYVASNSKHKPAKEATNFTSKVIITDHPGRIGN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3162 334 CDD EF1_alpha 9 218 - -
Mal1g3162 334 CDD EF1_alpha_II 221 309 - -
Mal1g3162 334 Gene3D - 1 220 IPR027417 -
Mal1g3162 334 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal1g3162 334 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal1g3162 334 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal1g3162 334 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g3162 334 PANTHER ELONGATION FACTOR 1-ALPHA 1 334 - -
Mal1g3162 334 SUPERFAMILY Translation proteins 222 312 IPR009000 -
Mal1g3162 334 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 218 IPR000795 GO:0003924|GO:0005525
Mal1g3162 334 PANTHER TRANSLATION FACTOR 1 334 - -
Mal1g3162 334 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal1g3162 334 Gene3D Translation factors 221 332 - -
Mal1g3162 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 240 IPR027417 -
Mal1g3162 334 Pfam Elongation factor Tu GTP binding domain 6 213 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3162 Mal-Chr1 48844562 48845693 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3162 1 334 Eukaryotic Initiation Factors Gene Family AT5G60390 76.744 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3162 K03231 - gmx:100801611 520.005