Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3155 ATGGTTTCGTCACAAGAAATTGTTGATCATAATGTTTCTCATGCTGAAATACAACAACAAGTGAGTCCTCGGGGGGAGATCACATTGTCACAAGGGATTGACAATGTAGCTAACAATGAATTATCAGATTCTGATGCTATGGCTTTTGAAATGGTATCATCATACTCTTCACCACTCAGGCAACATTCACAAAGCCCTAAAACTCCATCACATGAATTGTCTCTGATGCAATCTAATCAGTACACTCACTCTATCATACGTGAAAAAGTAAGAAAAGATGGATATAAGTGGCAAAAATATGGCCAGAAAAACATTAAGAAGAATCCACATAAAAGGGGATATTACAAATGCACACATTCAAATTGCAAGGCAAGAAAGAAATTTCATTGGTCAGATGATGGGAACCTCAAATATTTCACTTATACCAATCATCATAATCATCCTAATCCTCAATTAAGCATTGTACCACAAGTTGATTGTGTTCTTCCTGTTGTTGAACAGGGACAACATCAACTTTCTATGGTCGATGTGGAAGTTCAAGTTTCCATATCACATGAAAAATCTCACAACAATAACACTAATGCTACTAAAGCTGGTGTGTTAACCTATGAATCTCGCCTTGTTGTTCAGACTTCAAATGCAAATGATGTTGTAAATGACGTGTATCGCTGGCACAAATATGGGGAAAAATGTTACTATCGATGCTCCAACCCTGGATGCCTCGTGAAAAAATATGTTGATAAGTCTTCTCAAAATTCAGCAAATTTCATAACTACCTATAAGGGCCAACATGATCATGAACCACCTACCGGTGGGGTTGTCCCTCATAACACAACTACAAATGCTCAAATAATGGGTATTAATGGTGATCCAGAAGACATATCTGAAGGTAATACCATTTGTGATGATATGTCTCCATTTCGATCGATCATCTTTCCTAATCAGGGTATTGAAAGTGAATTAAATGAAGAAGAGCAACAAAATGAAGATTTTGTCAATGATGCCATGATTTGCGGTTCAAGTTATGAAGTTCCATGTAGATCAAAAGAACATGGTACTCTTAGTACAAAATCTGATGCAGAACTTGATCAGAGATTTGATTAG 1104 0.3659 MVSSQEIVDHNVSHAEIQQQVSPRGEITLSQGIDNVANNELSDSDAMAFEMVSSYSSPLRQHSQSPKTPSHELSLMQSNQYTHSIIREKVRKDGYKWQKYGQKNIKKNPHKRGYYKCTHSNCKARKKFHWSDDGNLKYFTYTNHHNHPNPQLSIVPQVDCVLPVVEQGQHQLSMVDVEVQVSISHEKSHNNNTNATKAGVLTYESRLVVQTSNANDVVNDVYRWHKYGEKCYYRCSNPGCLVKKYVDKSSQNSANFITTYKGQHDHEPPTGGVVPHNTTTNAQIMGINGDPEDISEGNTICDDMSPFRSIIFPNQGIESELNEEEQQNEDFVNDAMICGSSYEVPCRSKEHGTLSTKSDAELDQRFD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3155 367 ProSiteProfiles WRKY domain profile. 86 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g3155 367 SUPERFAMILY WRKY DNA-binding domain 213 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 ProSiteProfiles WRKY domain profile. 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 194 - -
Mal1g3155 367 PANTHER WRKY TRANSCRIPTION FACTOR 1 186 321 - -
Mal1g3155 367 Coils Coil 314 334 - -
Mal1g3155 367 MobiDBLite consensus disorder prediction 348 367 - -
Mal1g3155 367 Gene3D WRKY domain 77 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 Gene3D WRKY domain 202 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 186 321 IPR044810 GO:0003700
Mal1g3155 367 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 194 IPR044810 GO:0003700
Mal1g3155 367 Pfam WRKY DNA -binding domain 92 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 Pfam WRKY DNA -binding domain 219 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 SUPERFAMILY WRKY DNA-binding domain 86 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 SMART WRKY_cls 91 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 SMART WRKY_cls 218 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g3155 367 MobiDBLite consensus disorder prediction 350 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3155 Mal-Chr1 48724830 48726173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3155 56 300 WRKY Transcription Factor Family AT2G04880 34.114 2.24e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g3155 WRKY 1.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3155 K18834 - gmx:100781219 273.092