Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3154 ATGGAAACCGACACATGCAAGAGCAAGATTCAGGTGAACGGTTACTTCGTGTATACACGACGAAAGAGGAATCATCATCGCGAATCGAATAATGATGCAGCAAAGAGGCTGAAAACGGATGAAAATGTGGCGGCGGTGAAGAACGAGGTGGTGAAATGGACTTCGAAACGACAACGGCGGCCGTCGTTGAAGCTGAAAATTGAATCGGGTGAAGATACTTCTGCTGCTGCTAAACTCGCTGCTGAGAGTGTTGTGATTGAGAAGAGTGATTTTGTTAATGAGAAGTGGTTGAGTATGAAGGAGCTTTTTGATACTGGTTTTCTTGATGGTGTTCCTGTTGTTTATGTCGGTTGCAAAAAGGAGGCTTCAAATTCGAGATTGGAGGGTGTAATTGCTGGTGGAGGGATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAGAATTGTTCCTCCCTCCACATTTGAGATTCATGCCTGTAATATATATAAGAGGGCAACACAGTATATTTGTTTTGAAAATGGTAAGAGTCTTCTTGAGCTATTGGGAGTATGCAGGGCTGCTCCCTCACATTCTTTGGAAGCCACCATTCAAAATTTTCTTTGTTTACCGCCTGAAGAGAAGTATTTTACTTGCAGGAGCTGCAGAGGGTGCTTCCCTGTTTCAACTACTAAAAGAGTGGGGCTTATATGCCATTCTTGCATGGAAGCAAGCAAATCTGAAGACAGTCCTATTCGTGGAGTTGGCAAAAGAGTCAGGACTCCTCGACCATATCTGTTCTCTAGTCCATCTAGTATTTCTGAAACATCATGTATGTCATCACAAACTAAGAAACAGCAGAAGAAGAAAACAAAGTCATCAAAACGGTTAAGCATGTCAAAATATTCCAAGAAGAGTGCTTCTGTGCCTATTCTTACGCAGAAGAAAAGTCTGTGTAGCATGGAAACGAAGTCATCAAAACTGTCAGTCAAGTTGAAGATTGCTCCAATTACTTCAAATTCACAGTGTTCATCTCCACAAAATAAGAGTCAGTTGAGGATCAATAAGAAGCATCAGCGATTGCATAAATTAATTTTTGACGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAACGGCTTGAGGGTATAAAAAAGAAATCCGGAATTCTTTGTCGATGTTGTAACACTGTGATCAGCCCCGCACAGTTTGAGATTCATGCAGGATGGGCTTCTCGCAGGAAGCCTTATGCATACATCTACACGTCGAATGGGGTGTCTCTCCACGAGTTGGCATTATTCCTCTCAAAAGATCGGAAATGCACTGCAAAATATAATGATCTTGCATGCATTGTTTGTTGGGATGGTGGAAATCTGTTTCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACGGCGTGGTCGTTACTGTCCGATCTGTCAACACATGTTCCTTGGAGAAGGTTCTGTTTCTCTCAATCCTGATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATAGAACAGATTGCCAAGAGATGCATTCGCATAGTGAAAGACTTTGAAGCTGAGATTGGTGGATGTGCTTTATGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGTACAATAATAATATGTGATCAGTGTGAAAAGGAATATCACGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAATTGCCGGAAGGAGACTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGAGAACCTCCTAGTTAGGGCAGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAACAAGAGGATAGATGTTTGGAACCCCTTAATGAGATTGATATAAGATGGAGAATTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCGTTGCTTCTGGAGGCCCTGTCAATATTCAATGAATGCTTTGATCCTATAGTTGATGCAGCTACTGAACGTGACCTTATTCCTTCCATGGTTTATGGACGGAATTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTAATGGTCAATTCATCCGTGGTATCTGCGGGCATGCTACGGATTTTTGGTACCGATATTGCAGAACTCCCATTAATTGCTACAAGGCACAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTTTCGTGCATTGAAAGACTGGTGGCCTTCTTGAATGTGAAGAACCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCCATATGGAAATATAAATTTGGTTTTAGCAGGATGAAACCCGAGCAGCTTACCAACTATAGAAAGAACTGCCAACAGTTGATGGCATTCAAAGGGACAGTTATGCTTCACAAAGCAGTGCCTCGATGTCGGATCATTCATACTCAATCATGA 2442 0.4255 METDTCKSKIQVNGYFVYTRRKRNHHRESNNDAAKRLKTDENVAAVKNEVVKWTSKRQRRPSLKLKIESGEDTSAAAKLAAESVVIEKSDFVNEKWLSMKELFDTGFLDGVPVVYVGCKKEASNSRLEGVIAGGGILCSCCLCNGRRIVPPSTFEIHACNIYKRATQYICFENGKSLLELLGVCRAAPSHSLEATIQNFLCLPPEEKYFTCRSCRGCFPVSTTKRVGLICHSCMEASKSEDSPIRGVGKRVRTPRPYLFSSPSSISETSCMSSQTKKQQKKKTKSSKRLSMSKYSKKSASVPILTQKKSLCSMETKSSKLSVKLKIAPITSNSQCSSPQNKSQLRINKKHQRLHKLIFDEDGLPDGAEVAYYARGQKRLEGIKKKSGILCRCCNTVISPAQFEIHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKCTAKYNDLACIVCWDGGNLFLCDGCPRAFHKECASVSSTPRRGRYCPICQHMFLGEGSVSLNPDAVAAGRVEGVDPIEQIAKRCIRIVKDFEAEIGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCTRIHSILENLLVRAAERLPESLLDVIKKKQEDRCLEPLNEIDIRWRIVNGKVASPETRPLLLEALSIFNECFDPIVDAATERDLIPSMVYGRNLQTQDFGGMYCALLMVNSSVVSAGMLRIFGTDIAELPLIATRHKNRGKGYFQTLFSCIERLVAFLNVKNLVLPAAEEAESIWKYKFGFSRMKPEQLTNYRKNCQQLMAFKGTVMLHKAVPRCRIIHTQS* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3154 813 ProSiteProfiles Zinc finger PHD-type profile. 445 490 IPR019787 -
Mal1g3154 813 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 685 776 IPR016181 -
Mal1g3154 813 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 27 809 - -
Mal1g3154 813 SUPERFAMILY FYVE/PHD zinc finger 444 489 IPR011011 -
Mal1g3154 813 SMART PHD_3 535 592 IPR001965 -
Mal1g3154 813 SMART PHD_3 447 488 IPR001965 -
Mal1g3154 813 Pfam Tify domain binding domain 129 181 IPR032308 -
Mal1g3154 813 Pfam Tify domain binding domain 384 430 IPR032308 -
Mal1g3154 813 Gene3D - 632 801 - -
Mal1g3154 813 PANTHER AUTOIMMUNE REGULATOR 27 809 - -
Mal1g3154 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 534 594 IPR013083 -
Mal1g3154 813 MobiDBLite consensus disorder prediction 277 291 - -
Mal1g3154 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 434 522 IPR013083 -
Mal1g3154 813 MobiDBLite consensus disorder prediction 239 294 - -
Mal1g3154 813 SUPERFAMILY FYVE/PHD zinc finger 527 589 IPR011011 -
Mal1g3154 813 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3154 Mal-Chr1 48676882 48685253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3154 87 809 PHD Transcription Factor Family AT2G36720 49.592 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3154 - - gmx:100798276 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4280 3 122105763 122116192 Mal1g3154 1 48676882 48685253 PCT