Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3150 ATGAATAAGAGTACTTCCACTTACGTACAACCAAATCAGTGGGTACCAAAATGTGAAGATGAATTAAAGCCTAAGCTGGGGCAACTATTTGATACTTTAAAGGAAGGTGAACTATTTTATAAAAATTATGCACATACCGTTGGATTTAGTGTGCGTTCTTCATCAGCAACGAAAGATAAAAATGGTGTGGCGCGTTGGAAGTATTTTGTATGCTCGAAAGAAGGTTATTTACCAAACAAGACAACACATGTGGAGCAAAGTGAATCAACCGTCAAGACTAGAAGAAGGAGTCTTACAAGAGAAGGATGCAATGCAAAAGTTGTTTTCAAACTGACAGAAGAAGGTAAACAGGAGCTTATTCGATTTCATGAAATCCATACACATCCACTTGCTTCTCCCACGAAAAAACAATTTCTAAGATCATTTAGAAAAGTGAATCCTGTTCACAAGAGTTTATTGCATGCATATAGTAGAGCCAATGTTGGGCCTTCAAAAACATACCATTTATTGAAAGAGCAAGTTGGGGGTTATGAAAATGTTGGGTGCACACAGAGAGATCTCCAAAATTACTCGAGAGATTTAAAAACTTTGAATAAAGAATCTGATGCACATGTTTTTATTGATAACTTTAGAAGGAAGCAAGAAGTTGATCCATCATTCTATTATGCATATCAGTTAGATGCTGAAGGGCATCTAAAGCATGCTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCTTTGTTTGGGGATGTTGTTTCGTTTGATACTACATATCGAACAAATAAATATTCCTTGATTTTTGCACCTTTTACGGGAGTAAACCATCATAGACAATGTATTACTTTTGGAGCAGGGTTTTTAGCAAATGAGAAAGTTGAATCATTTATATGGTTGTTTGAAAAGTTTTTGGAAGCAGTGGGAGGAAATAAACCAATTCTTCTAATAACTGATCAGGATCCTGCCATGAAAGTTGCTATAGAAAATATTTTTACATCTTCTATTCATAGATTTTGTATGTGGCACATTATGAAAAAAGTTTCTGAAAAGGTAGGTTCTTCTTTGAATGATAACGAGGATTTCAACAATAGTTTGAAGTCGTGCGTTTGGAGTTCAGAGACACCAAATGATTTTGAAGAATCATGGCAATCTATAATCACTAGGTTTGAATTAGAAAATAATGGTTGGTTGTCACATATGTTTGATCTTCGTAGCATGTGGATCCCAGCTTACTTTAAGGATATTCTTTTGGCTGGGATATTGAGGACAACATCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAATTTCTTGAACCCTAATATTAGCTTGGTTGAATTTTGGATGAGGTTTAATTCTGCATTAGAAGCCCAAAGACATAAGGAGTTACTTGCTGATAATAATTCACTTCATTCTATGCCAAAACTAATATTGGATCGTGGTTTAGAGCGGCATGCAAGAGATGTTTATACTCATGAGAACTTTTATATCTTTCAAAAAGAATTATGGGCTGCTTGTCTAGATTGTGGAATTGAAGATAAGAAAGAGGAAAATGGAGTTGAAATATTGCAAATAATTGATAACAGTGATGTTCATGGCAAACTTCGAGAAGTGGTTTACAATTTGTTTGATAACAATGCAAATTGCTCTTGCAAAATGTTTGAGGCTCAAGGCATACCTTGTAGACACATACTTTGTGTTGCAAAAGGAAAAGGTTTAAGTGAAATACCAAGTGTGTACATCATGAACAGGTGGACTAAGTCTGCAAATAGAAAACCTATTTTTGATTTAGGTGGCAATGTCTTGGAAATGTGTTCTAAAGCACAGAAGGATAACAAGCTCATTTCAGATGTGTGGGATCAATTACGTATGTGTGTGGAAAAGGCTGGGCATGACAAGGAAAAATTGACTTTTGTGTTGAATGGAGCTATTAACATGGTAAAGCAATTGGATGTTTTTGAAGGGGGTTCTAAGCAAACCAAAGTAGATGATTTTCAAGCCTTTACCGGGTCCATTATCCCTGAGGAAATCGAAATTCTCCCCCCAAAATGTTCAAAAACTAAAGGTAGTGCTAAAAGAATCAAAAGTGGTAAAGAGAAGGCCGTTGAACAACAACAAAAAAGAACAAGACTTTGTAAATCATGTTGCGAATATGCACATCACGATAGCCGCAATTGTCCTAAAAAGAACAAGACTTAG 2199 0.3538 MNKSTSTYVQPNQWVPKCEDELKPKLGQLFDTLKEGELFYKNYAHTVGFSVRSSSATKDKNGVARWKYFVCSKEGYLPNKTTHVEQSESTVKTRRRSLTREGCNAKVVFKLTEEGKQELIRFHEIHTHPLASPTKKQFLRSFRKVNPVHKSLLHAYSRANVGPSKTYHLLKEQVGGYENVGCTQRDLQNYSRDLKTLNKESDAHVFIDNFRRKQEVDPSFYYAYQLDAEGHLKHAFWADGICRKNYSLFGDVVSFDTTYRTNKYSLIFAPFTGVNHHRQCITFGAGFLANEKVESFIWLFEKFLEAVGGNKPILLITDQDPAMKVAIENIFTSSIHRFCMWHIMKKVSEKVGSSLNDNEDFNNSLKSCVWSSETPNDFEESWQSIITRFELENNGWLSHMFDLRSMWIPAYFKDILLAGILRTTSRSESENSFYGNFLNPNISLVEFWMRFNSALEAQRHKELLADNNSLHSMPKLILDRGLERHARDVYTHENFYIFQKELWAACLDCGIEDKKEENGVEILQIIDNSDVHGKLREVVYNLFDNNANCSCKMFEAQGIPCRHILCVAKGKGLSEIPSVYIMNRWTKSANRKPIFDLGGNVLEMCSKAQKDNKLISDVWDQLRMCVEKAGHDKEKLTFVLNGAINMVKQLDVFEGGSKQTKVDDFQAFTGSIIPEEIEILPPKCSKTKGSAKRIKSGKEKAVEQQQKRTRLCKSCCEYAHHDSRNCPKKNKT* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3150 732 SMART 26again6 547 574 IPR006564 GO:0008270
Mal1g3150 732 Pfam SWIM zinc finger 545 567 IPR007527 GO:0008270
Mal1g3150 732 Pfam FAR1 DNA-binding domain 39 131 IPR004330 -
Mal1g3150 732 Coils Coil 180 200 - -
Mal1g3150 732 ProSiteProfiles Zinc finger SWIM-type profile. 536 572 IPR007527 GO:0008270
Mal1g3150 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 194 636 IPR031052 GO:0006355
Mal1g3150 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 147 IPR031052 GO:0006355
Mal1g3150 732 Pfam MULE transposase domain 252 346 IPR018289 -
Mal1g3150 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 194 636 - -
Mal1g3150 732 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 15 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3150 Mal-Chr1 48632527 48635040 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g3150 MULE 6.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3150 - - soe:110798711 847.04