Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3119 ATGAATGTGAAAACATATAAATATCAAGTAGCCATGCAAGGAGAAAATTTGCGTAAGGGGACTTGGCTTCAAGAGGAAGATGAACAATTGATTAGCTTTGTGACCCGTCTCGGGGAACGAAGATGGGATTCCCTTGCTAAAGTAGCCGGGCTTAGGAGAAGTGGTAAAAGCTGTAGATTAAGGTGGTTGAACTATCTTCGTCCAAATCTCAAACATGGCCCTTTTAGTGTTGAAGAAGAGAGGCTTATTGTTCAGCTTCAGAAGCAATGGGGTAACAAGTGGTCCAAGATTGCTCGTAGGCTTCCAGGAAGAACAGACAATGAAATCAAGAACTATTGGAGAACTCATTTACAAAAGAGAGTACAAGTTCAACAAGAAGGTGAGTTCATGTATGAAGTAGAAAACGTAGCACATGGTTTCAACAACAAAAACATTGATGTGGTTTCCAACAGTGAGGGAGAGACAAAGGATAGCTCTGTAGACAGTTGTCCCTTATCAGATTGGGAAATGAGAAACTCACCTTATCATGAAAGTAGAATATCAAATTGGATAGAAGAATTGCAAAATGGATTTGGTGACAAAGAAAAGGAATTAGGACAAGATTTTAATAGTATTAATGGATCAATGTATGAATATAATTCCCAAGAAGAATATGATACTTGGGATTATTCAGGTTTTCTGTGGGACTTATGA 693 0.3824 MNVKTYKYQVAMQGENLRKGTWLQEEDEQLISFVTRLGERRWDSLAKVAGLRRSGKSCRLRWLNYLRPNLKHGPFSVEEERLIVQLQKQWGNKWSKIARRLPGRTDNEIKNYWRTHLQKRVQVQQEGEFMYEVENVAHGFNNKNIDVVSNSEGETKDSSVDSCPLSDWEMRNSPYHESRISNWIEELQNGFGDKEKELGQDFNSINGSMYEYNSQEEYDTWDYSGFLWDL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3119 230 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Mal1g3119 230 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 230 - -
Mal1g3119 230 Gene3D - 73 138 - -
Mal1g3119 230 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mal1g3119 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mal1g3119 230 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Mal1g3119 230 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mal1g3119 230 Coils Coil 227 230 - -
Mal1g3119 230 PANTHER MYB TRANSCRIPTION FACTOR 12 230 - -
Mal1g3119 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Mal1g3119 230 SMART sant 18 68 IPR001005 -
Mal1g3119 230 SMART sant 71 119 IPR001005 -
Mal1g3119 230 CDD SANT 74 117 IPR001005 -
Mal1g3119 230 Gene3D - 10 72 - -
Mal1g3119 230 CDD SANT 21 66 IPR001005 -
Mal1g3119 230 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3119 Mal-Chr1 47351456 47353140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3119 15 122 MYB Transcription Factor Family AT5G59780 62.963 1.13e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g3119 Myb_DNA-binding 8.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3119 K09422 - gmx:100783472 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3119 1 47351456 47353140 Mal1g3119 1 47351456 47353140 ECH