Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3103 ATGACTGAAGCAAGTGGACTTGTTTCTGTAGAAAATCCAAAGGAAGAAAGCTTCATCTCAGTTTCAGGTTCAACTGGGACATTAATTCCAAGTGTAGAATCTCGAATAGTTAGTTTGGAAACATCAAAGCCCCTTCCACCAAATCAATTAGGAGAAATTTGGCTAAGAGGACCTACTATGATGCAAGGATACTTTAACAATCCAGAGATTCCAGAAGCAACAAAACAGACCATTAATGATCAGGGTTGGATGCTTACAGGGGATCTTGGATATTTTGACGAAAAGGGACAACTATTTGTCGTGGATCGAATAAAACAGCTCATCAAGTGTAACGAATATCAAGTGGCCCCGACTGAACTTGAAGACTTACTAGTTTCTCATCCTGAAATTTCTGATGCTGGGGTGATACCATCCCCTGATGCTAAAGCTGGTGAGGTTCCAGTGGCTTTTGTTGTTCGCTCGCCCAATAGCTCGATTACTGAAGAAGACATTCAGAAGTTTGTAGCAAAACAGGTTGCACCATACAAAAGGTTGCGGCGAGTGACTTTTATAGAGAAGATTCCAAAGTCACTCACAGGAAAGATCTTAAGAAAGGATCTCGTAAGTTTTGATCGACAAAAGACATCAAAGTTATAG 636 0.4057 MTEASGLVSVENPKEESFISVSGSTGTLIPSVESRIVSLETSKPLPPNQLGEIWLRGPTMMQGYFNNPEIPEATKQTINDQGWMLTGDLGYFDEKGQLFVVDRIKQLIKCNEYQVAPTELEDLLVSHPEISDAGVIPSPDAKAGEVPVAFVVRSPNSSITEEDIQKFVAKQVAPYKRLRRVTFIEKIPKSLTGKILRKDLVSFDRQKTSKL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3103 211 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 206 - -
Mal1g3103 211 Gene3D - 1 105 IPR042099 -
Mal1g3103 211 Gene3D - 106 208 IPR045851 -
Mal1g3103 211 Pfam AMP-binding enzyme C-terminal domain 119 194 IPR025110 -
Mal1g3103 211 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 1 206 - -
Mal1g3103 211 SUPERFAMILY Acetyl-CoA synthetase-like 1 204 - -
Mal1g3103 211 Pfam AMP-binding enzyme 1 110 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3103 Mal-Chr1 46984514 46987026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3103 1 207 Monolignol Biosynthesis Gene Families AT4G05160 66.184 1.10e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3103 K01904 - jre:108982339 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3103 1 46984514 46987026 Mal1g1889 1 24606669 24608914 ECH
Mal1g3103 1 46984514 46987026 Mal1g3103 1 46984514 46987026 ECH