Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3102 ATGGCGAAAAACTTCTTCGATCTCAAAACGATGACGTATTCCTCACCAAGACAATCCATACCCCTTCCAACTGATCCCAACCTCTCCCTAACCTCCTTCCTCTTCCAATCAACTTCCTCCGTCGCCGACACCATCGCCCTGGCCGACGCCCAAATTGGCGACTCCCTAACCTTCCGCCAACTCAAAATCCAAGTCTACTCCCTCTCCCGCTCCCTCCATCGCCTCGGAATCAACCGAGGTGATGTAGTTTTGCTATTAGCACCTAACTCCATACGTTTTCCCGTCTGCTTCCTCGCTATAGTAGCCATAGGTGCTATTGCCACCACCTGTAGTCCTTTATACACCGTCTCTGAACTCTCTAAACAAATCCATGATTCCAAACCCAAGCTTGTTATAACTGTATCCGAGCTTTTTCACAAAATCGAAGCATTGACCTCAGTGTTACCATTAATATTACTCGATGATCCTGCGAAGAACTTTGGTTCTAGAGTTTCCAACTACAAGGATCTGATCGGAGAGTTATATAATAGCTCCGATATGATTCCGGTGAATAATGATGTTTCACAATCCAACGTGGCGGCAATTCTTTACTCTTCAGGTACCACAGGGAAAAGTAAGGGAGTGATGCTGACTCACCGAAACTTAATAGCGACGGCGTTGGCGGGAGCGGCGGATCAAGACCGAAACGGCGACGGGAAGAACGTGTTCGTGTGTTTGGTGCCAATGCATCACGTGATGGGATTGGTTGGGATAACGTACACGCAGCTGAGGAGAGGGAACACAGTGGTGGTGATGGGTGGTAGATTTGATCTGGAGAAGACTTTTGCGGCGGTGGAGAAGTTTAGTGTGACGCATTTGTATGTTGCTCCGCCGGTGATGGTGGAGTTGATAAAGCGGCGTGACGTTGTTAGCGGTTACGACTTATCCTCGCTGAAGCAATTGGTCGGTGGTGCTGCTCCTGTCGGGAAAGATTTGATGCAAGAGTGTGCTAAGATTCTACCCCACATCCAAATCATTCAGGGTTATGGCATGACCGAAGCATGTGGAGTTGTTTCCTTAGAAAATCCAAAGAAAGGAAGCTTCATTTCAGTTTCAGGTTCAACTGGAACACTAATTTCAAATCTAGAGTCCCAAATAGTTAATTTGGATACATTAAAGCCCCTTCCATTGAACCAATTAGGGGAAATTCGGATACGAGGACCTACTATAATGCATGGATATTTTAACAATCCAGAAGCAACAAAACTGGCAATTAATGATCAAGGTTGGATGATTACAGGAGATCTTGGATATTTTGACGAAAATGGGCAACTGTTTGTAGTGGATCGAATAAAAGAACTCATTAAGTGTAGCGGATATCAAGTCGCGCCAGCTGAACTTGAAGACTTGCTTGTTTCTCATCCAGAAATTTCTGATGCTGGGGTGATAGCATCCCCCGATGCCAAAGCTGGCCAGGTTCCAGTAGCTTTTGTTGTTCGCTCACCTAATAGCTCGATAACCGAAGAAGATATTGAGGAGTTTGTAGCAAAACGGGTTGCACCATACAAAAGGCTACGACGAGTGACATTTTTGGAGAAGATTCCAAAGTTAGCCACAGGAAAGATCTTAAGAAAGGATCTTGTAAGTTTTGATCGACAAAAAACATCAAAGTTATAG 1656 0.4523 MAKNFFDLKTMTYSSPRQSIPLPTDPNLSLTSFLFQSTSSVADTIALADAQIGDSLTFRQLKIQVYSLSRSLHRLGINRGDVVLLLAPNSIRFPVCFLAIVAIGAIATTCSPLYTVSELSKQIHDSKPKLVITVSELFHKIEALTSVLPLILLDDPAKNFGSRVSNYKDLIGELYNSSDMIPVNNDVSQSNVAAILYSSGTTGKSKGVMLTHRNLIATALAGAADQDRNGDGKNVFVCLVPMHHVMGLVGITYTQLRRGNTVVVMGGRFDLEKTFAAVEKFSVTHLYVAPPVMVELIKRRDVVSGYDLSSLKQLVGGAAPVGKDLMQECAKILPHIQIIQGYGMTEACGVVSLENPKKGSFISVSGSTGTLISNLESQIVNLDTLKPLPLNQLGEIRIRGPTIMHGYFNNPEATKLAINDQGWMITGDLGYFDENGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIASPDAKAGQVPVAFVVRSPNSSITEEDIEEFVAKRVAPYKRLRRVTFLEKIPKLATGKILRKDLVSFDRQKTSKL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3102 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 546 - -
Mal1g3102 551 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 546 - -
Mal1g3102 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Mal1g3102 551 CDD 4CL 22 540 - -
Mal1g3102 551 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Mal1g3102 551 SUPERFAMILY Acetyl-CoA synthetase-like 26 544 - -
Mal1g3102 551 Pfam AMP-binding enzyme 41 450 IPR000873 -
Mal1g3102 551 Gene3D - 12 445 IPR042099 -
Mal1g3102 551 Gene3D - 446 548 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3102 Mal-Chr1 46959201 46964256 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3102 13 547 Monolignol Biosynthesis Gene Families AT4G05160 54.982 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3102 K01904 - qsu:112025709 638.262