Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3099 ATGGCGAAAAATTGCTTTGACATCAAAACACTGACATATTCCTCACCAAGACCATCTATCCACCTCCCTACTGATCCCAACCTCTCCCTAACCTCCTTCCTCTTCCAATCAACTTCCTCCGTCTCCGACACCATCGCCCTCGCCGACTCCCAAACCGGCGAATCCCTAACCTTCAGCCAACTCAAAACTCTAGTCTCCAACCTCTCCGACTCCCTACTCATCCTCGGAATCAAACCAGGCGACGTAGTTTTGCTATTTGCACCTAACTCCATACGTTTTCCCGTTTGCTTCCTTGCTATTGTCGCCATAGGTGCTATTGCCACCACCTGTAGTCCTTTATACACCGTCTCCGAACTTACAAAGCAAATACAAGATTCCAAACCCAAGCTTGTTGTAACCGTATCTGAACTATTCAACAATTTTGAAGGAATGAACTTTGATTTAACTTTTATATTGCTCGACGATAAACCTTTAACTCGCATATCTAAGTCTCGTGTCTGGACCTACGGTGATCTGAGCAGAGAGTGGTACATAAGCTCCGACGATATTCCGGCGAAAAGTCCCGTTTCACAATCCGACGTGGCGGTGATTCTGTACTCTTCAGGCACGACGGGGAGAAGCAAGGGAGTGAAGCTGACTCATCGGAACTTTATAGCGACGGCGGTGGCGGGAGTGGCGGATCAGGATTTGTACGGGGAGGGGAAGAATGTGTTCTTGTGTTTGGTGCCAATGCATCATGTGATGGGATTGGCGGTGATATTGTACACGCAGCTGAGGAGAGGGAATACGGTGGTCTCCATGGGGAGATTTGAACTGGAGAAGACTTTGGCGGCGGTGGAGAAGTTTCGGGTGACACATTTGTTTGTTGCTCCGCCGGTTATGGTGGAGCTGGTCAAGCGGCGCGGCGTGGTGAGCGGTTACGACTTGTCGTCGTTGAAGCAGCTTGCCGGCGGTGCTGCTCCTTTAGGAAAAGATTTGATGCAAGCGTGTGCTGAGATTCTACCCAAAATTGAAATCATTCAGGGGTATGGCATGACTGAAGCATGTGGACTTATTTCCTTTGAAAATCCAAAGGATGGAAGCTTCCTTTCAAATTCAGGTTCAACTGGAATACTAGTTCCAAGTGTGGAATCCCAAATTGTTAGTTTGAAAACATTGAAGCCCCTTCCACCGAATCAATTAGGGGAAATTTGGCTACGAGGACCTGTTATAATGCAAGGATATTTTAACAATCCAGAAGCAACAAAAGAGACCATTAATGATCAGGGTTGGATGCTTACAGGTGATCTTGGATATTTTGATGAAAAAGGACAATTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAGTGTAACGGGTATCAAGTGGCGCCAGCTGAACTTGAAGACTTACTGATTTCTCATCCTAAAATTTTAGATGCCGGTGTGATTCCGTCTCCTGATGCCAAAGCTGGCGAGGTTCCAGTTGCTTTTGTTGTTCGCTCACCCAATAGCTCGATAACCGAAGAAGACATCCAGGCGTTTGTAGCAAAACAAGTTGCACCATACAAAAGGTTGCGTCGAGTGAATTTGATAGAGAAGATTCCAAAGTCACCCACAGGAAAGATCTTAAGAAAGGATCTCGTCACTTTGGATCGACAAATGTTATCAAAGTTATAG 1659 0.4605 MAKNCFDIKTLTYSSPRPSIHLPTDPNLSLTSFLFQSTSSVSDTIALADSQTGESLTFSQLKTLVSNLSDSLLILGIKPGDVVLLFAPNSIRFPVCFLAIVAIGAIATTCSPLYTVSELTKQIQDSKPKLVVTVSELFNNFEGMNFDLTFILLDDKPLTRISKSRVWTYGDLSREWYISSDDIPAKSPVSQSDVAVILYSSGTTGRSKGVKLTHRNFIATAVAGVADQDLYGEGKNVFLCLVPMHHVMGLAVILYTQLRRGNTVVSMGRFELEKTLAAVEKFRVTHLFVAPPVMVELVKRRGVVSGYDLSSLKQLAGGAAPLGKDLMQACAEILPKIEIIQGYGMTEACGLISFENPKDGSFLSNSGSTGILVPSVESQIVSLKTLKPLPPNQLGEIWLRGPVIMQGYFNNPEATKETINDQGWMLTGDLGYFDEKGQLFVVDRIKELIKCNGYQVAPAELEDLLISHPKILDAGVIPSPDAKAGEVPVAFVVRSPNSSITEEDIQAFVAKQVAPYKRLRRVNLIEKIPKSPTGKILRKDLVTLDRQMLSKL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3099 552 SUPERFAMILY Acetyl-CoA synthetase-like 24 548 - -
Mal1g3099 552 Pfam AMP-binding enzyme 41 451 IPR000873 -
Mal1g3099 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 5 544 - -
Mal1g3099 552 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Mal1g3099 552 CDD 4CL 22 541 - -
Mal1g3099 552 Gene3D - 11 446 IPR042099 -
Mal1g3099 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 544 - -
Mal1g3099 552 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Mal1g3099 552 Gene3D - 447 549 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3099 Mal-Chr1 46910660 46920979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3099 13 552 Monolignol Biosynthesis Gene Families AT4G05160 58.564 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3099 K01904 - qsu:112025709 664.455