Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3098 ATGTCACAAGATTCTGATGAAAGTATAAAAACCTCTGAGCAATGGAAATGGTCTGAAATGCAAGGAGAACATTCATTATCCAAGGAACAAATGGAAGAAGAAGCTTCATTACCAAATAACAAAAGTTGTGATGTTTCTAATGAAAATGAGAAGAAGAGTAAGAAGAGTGTTGCTTCTGTTGGGTTTTGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTATATTCTCATGACAATTGGAACTATAGGAGCTATTGTTCATGGTTGTTCTTTACCACTCTTTCTTCGGTTTTTTGCTGATCTTGTTAACTCTTTTGGTTCTAATGCTAATAATTTGGATAAGATGACCCAAGAAGTTGCCAAGTATGCGCTTTACTTTCTGGTTGTTGGTGCTGCTATTTGGGCATCTTCATGGGCAGAGATTTCTTGTTGGATGTGGACCGGTGAGAGGCAATCAACAAGGATGAGAATTAAGTATCTTGAAACTGCTTTGGATCAAGACATTCAATTCTTTGATACCGAAGTTCGAACTTCCGATGTTGTTTTTGCTATTAACACTGATGCTGTCATGGTACAAGATGCCATAAGTGAGAAGTTAGGTAATTTTGTTCACTATATGGCTACATTTGTTTCTGGATTTGCTGTTGGTTTCACTGCTGTTTGGCAATTAGCATTGGTTACACTTGCTGTAGTCCCTATGATAGCTGTAATAGGAGGCATTCATACTACCACTTTGGCCAAGTTATCTGGTAAAAGCCAAGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGACTATTGTTCAAATTAGAGTGGTGTTGGCATTTGTTGGGGAGACAAAAGCACTACAAGGCTATTCATCTGCTTTGAGGATTGCTCAAAAGATTGGTTACAGGACTGGATTTGCAAAGGGAATTGGATTAGGTGCTACTTACTTTGTTGTTTTCTGCTGTTATGCACTTTTGTTATGGTATGGAGGCTATTTGGTTAGGCATGACTACACTAATGGAGGACTTGCAATTTCCACCATGTTTGCTGTCATGATTGGTGGCTTGGCTTTAGGCCAGTCTGCACCAAGCATGGTTGCATTTACAAAGGCAAGAGTTGCTGCTGCGAAAATTTTCCGTGTGATCGATCACAAGCCTTGTATAGACAAAAAAAGTGAATCAGGTTTGGAGTTAGAAACTGTGACAGGACTAGTGGAGCTTAAAAATGTTGATTTTTCATATCCATCAAGATCTGAAGTTCAGATCCTTCACAATTTCTCCTTGAATGTTCCTTCTGGCAAAACCATAGCTTTGGTTGGTAGTAGTGGATCTGGCAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGACCCTTCTTCTGGACAAGTTTTGCTAGATGGACATGATGTGAAAACATTGAAGCTTAAATGGTTGAGACAACAAATAGGACTTGTGAGCCAAGAGCCTGCATTATTTGCCACCACAATTAGAGAAAATATACTGTTGGGAAGGTCTGATGCAGATCAGGTTGAGATTGAAGAAGCTGCTAGAGTAGCTAATGCTCATTCATTCATCATCAAACTTCCTGAAGGTTATGAAACTCAGGTAGGGGAAAGAGGGCTGCAACTATCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAATCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTGGACTCTGAGTCAGAAAAGCTGGTTCAAGAAGCTCTTGATAGGTTCATGATTGGTAGAACAACTCTTGTAATTGCACATCGCCTCTCCACTATTCGCAAAGCTGACCTTGTTGCTGTACTTCAACAAGGGAGTGTTTCCGAAATTGGAACTCATGATGAACTCTTTGCTAAAGGTGAAAATGGAGTTTATGCCAAGCTTATCAAAATGCAGGAGATTGTGAATGAAAGTTCAATGAACAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTAAGCTCACCGATAATTACTCGGAATTCTTCTTGTGGTGGCCGGTCACCGTACTCAAGGAGGTTGTCGGATTTCTCTACATCAGATTTTAGTCTGTCGCTTGATGCATCACATCCAAATTTCAGGCTTGAAAAGCTTGCCTTCAAAGACCAAGCTAGTTCCTTTTGGCGACTTGCGAAAATGAACTCTCCTGAATGGCTATATGCATTGATTGGTTCCATAGGCTCCATTGTTTGTGGATCCCTTAGTGCATTCTTTGCTTATGTTCTCAGTGCTGTACTCAGTGTCTATTACAATCCAAGCCACAAACACATGATTAGAGAAATCGAAAAATACTGCTACTTGCTAATTGGTCTTTCATCGGCTGCACTTATATTTAATACATTGCAGCACTTCTTCTGGGATACTGTTGGCGAAAATCTGACTAAACGAGTGCGGGAGAAAATGTTGAGTGCGGTGCTTAAAAATGAAATGGCATGGTTTGATCGAGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTAGCTCTTGATGCCAACAATGTTAGATCTGCCATTGGAGATCGGATTTCGGTAATTGTGCAGAACACTGCACTCATGCTTGTTGCTTGTACTGCAGGGTTTGTATTGCAGTGGCGCCTTGCCCTTGTCCTCGTTGCTGTCTTCCCGGTTGTTGTTGCAGCAACCGTTTTGCAGAAAATGTTCATGTCTGGTTTCTCTGGTGACTTGGAAGCTGCTCATGCTAAGGCTACACAACTAGCTGGAGAGGCTATAGCCAATGTAAGGACTGTTGCTGCCTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCGCCTCAAACCTTGAAACTCCACTACGGCGCTGTTTTTGGAAGGGGCAAATTTCTGGAAGTGGATATGGAATAGCACAGTTTGCACTCTATGCTTCATATGCTCTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAACACGGCATCTCTGATTTCTCTAAGACAATCCGAGTTTTTATGGTCCTCATGGTCTCTGCTAATGGTGCTGCCGAAACTTTAACCTTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAGGTCGGTTTTTGATCTCCTTGACCGTAGAACTGAAATTGAGCCAGATGATCCAGATGCTGTCGTTGTCCCTGACTGTCTTCGCGGGGAAGTAGAACTCAAGCATGTTGACTTCTCTTATCCAAGCCGACCGGATATGCCGGTTTTCCGCGACCTTAATCTTCGTGCAAGGGCAGGTAAAACTCTTGCCCTTGTAGGCCCTAGTGGATGCGGTAAGAGCTCGGTTATTGCACTCATACAAAGATTCTATGATCCAACATCGGGCCGAGTCACGATTGATGGAAAGGACATAAGGAAATATAATCTCAAGTCCCTTAGAAAACACATTGCTGTGGTGCCTCAAGAGCCATGCCTATTTGCTACTACTATTTATGAAAACATTGCTTATGGACATGACTCTGCTACCGAAGCCGAGATTATTGAGGCCGCAACTCTTTCCAATGCTCACAAGTTCATATCTTCTCTGCCAGATGGATACAAGACGTTTGTTGGCGAACGAGGAGTTCAACTATCCGGCGGACAGAAGCAAAGAATAGCGATTGCTCGAGCTTTTGTGCGGAAAGCAGAACTTATGCTTCTTGATGAAGCAACAAGTGCACTTGATGCCGAATCCGAGAGGTCTGTTCAGGAGGCCCTAGACCGTGCCTGCTCTGGAAAAACGACCATCATTGTTGCACACAGGCTATCGACTATAAGGAATGCCAATCTCATTGCAGTGATTGATGATGGGACAGTTGAAGAACAAGGCTCACATTCACATTTGTTGAAAAATCACCCGGATGGGATCTATGCGCGCATGATTCAACTGCAAAGGTTGACAAATAACCAAGTCGTTGGGACGGCCTCGAGTTCGAGTTCTTCAGCAAGAACAAAAGATGATGAAAAAGAAGGCTAG 3972 0.4265 MSQDSDESIKTSEQWKWSEMQGEHSLSKEQMEEEASLPNNKSCDVSNENEKKSKKSVASVGFCELFRFADGLDYILMTIGTIGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVAKYALYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIKYLETALDQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFVHYMATFVSGFAVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSGKSQEALSQAGNIVEQTIVQIRVVLAFVGETKALQGYSSALRIAQKIGYRTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHDYTNGGLAISTMFAVMIGGLALGQSAPSMVAFTKARVAAAKIFRVIDHKPCIDKKSESGLELETVTGLVELKNVDFSYPSRSEVQILHNFSLNVPSGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDVKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRSDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIKMQEIVNESSMNNARKSSARPSSARNSVSSPIITRNSSCGGRSPYSRRLSDFSTSDFSLSLDASHPNFRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYNPSHKHMIREIEKYCYLLIGLSSAALIFNTLQHFFWDTVGENLTKRVREKMLSAVLKNEMAWFDREENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMSGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFASNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDAVVVPDCLRGEVELKHVDFSYPSRPDMPVFRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVTIDGKDIRKYNLKSLRKHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLSNAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGTVEEQGSHSHLLKNHPDGIYARMIQLQRLTNNQVVGTASSSSSSARTKDDEKEG* 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3098 1323 Gene3D ABC transporter type 1, transmembrane domain 64 655 IPR036640 GO:0005524|GO:0016021
Mal1g3098 1323 Gene3D ABC transporter type 1, transmembrane domain 1023 1303 IPR036640 GO:0005524|GO:0016021
Mal1g3098 1323 Pfam ABC transporter transmembrane region 77 350 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3098 1323 Pfam ABC transporter transmembrane region 735 1004 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3098 1323 MobiDBLite consensus disorder prediction 1304 1323 - -
Mal1g3098 1323 ProSitePatterns ABC transporters family signature. 540 554 IPR017871 GO:0005524
Mal1g3098 1323 MobiDBLite consensus disorder prediction 1 48 - -
Mal1g3098 1323 CDD ABC_6TM_Pgp_ABCB1_D2_like 723 1039 - -
Mal1g3098 1323 Gene3D - 1046 1297 IPR027417 -
Mal1g3098 1323 Gene3D - 391 641 IPR027417 -
Mal1g3098 1323 ProSitePatterns ABC transporters family signature. 1196 1210 IPR017871 GO:0005524
Mal1g3098 1323 Pfam ABC transporter 419 568 IPR003439 GO:0005524
Mal1g3098 1323 Gene3D ABC transporter type 1, transmembrane domain 714 1022 IPR036640 GO:0005524|GO:0016021
Mal1g3098 1323 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g3098 1323 SUPERFAMILY ABC transporter transmembrane region 721 1041 IPR036640 GO:0005524|GO:0016021
Mal1g3098 1323 CDD ABC_6TM_Pgp_ABCB1_D1_like 77 374 - -
Mal1g3098 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 640 IPR027417 -
Mal1g3098 1323 SUPERFAMILY ABC transporter transmembrane region 65 385 IPR036640 GO:0005524|GO:0016021
Mal1g3098 1323 SMART AAA_5 428 614 IPR003593 -
Mal1g3098 1323 SMART AAA_5 1084 1276 IPR003593 -
Mal1g3098 1323 CDD ABC_MTABC3_MDL1_MDL2 1057 1296 - -
Mal1g3098 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 734 1021 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3098 1323 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 77 1300 IPR039421 -
Mal1g3098 1323 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 77 1300 - -
Mal1g3098 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1048 1296 IPR027417 -
Mal1g3098 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 401 637 IPR003439 GO:0005524
Mal1g3098 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 79 366 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g3098 1323 CDD ABC_MTABC3_MDL1_MDL2 401 640 - -
Mal1g3098 1323 MobiDBLite consensus disorder prediction 647 666 - -
Mal1g3098 1323 Pfam ABC transporter 1076 1224 IPR003439 GO:0005524
Mal1g3098 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1057 1293 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3098 Mal-Chr1 46843407 46851615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3098 50 1320 Calmodulin-binding Proteins AT2G36910 86.792 0.0 2263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3098 1 46843407 46851615 Mal1g3098 1 46843407 46851615 ECH