Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3096 ATGGGAGGTAAGTGTCCACACAGGAAGGTGAAGAAGAGAAGATTATCTCACAAAACAGATCGGCGTGCAAGATTCCTTATCAAAGGAGATGATATGGTTTATGATGAATTAAACAAGCCTGTAGAACAGAGAAAAGCTTTACCTGTTGATGAAGATTTACCTGGAATGGGACAGCACTATTGCCTTCACTGCGATCGATTCTTTGCTAGTGTAGCTGTGAGGGATGAGCATTTTAAGACAAAAAAACACAGGAGACGTGTGAAACAGATGATGGGTGATGCACCACACACTCAGCTTGATGCTGAGTTAGCTGCAGGGATGGGAATGCCAGATAATGGACCAAAGTTAATGTCTATGTAA 360 0.4222 MGGKCPHRKVKKRRLSHKTDRRARFLIKGDDMVYDELNKPVEQRKALPVDEDLPGMGQHYCLHCDRFFASVAVRDEHFKTKKHRRRVKQMMGDAPHTQLDAELAAGMGMPDNGPKLMSM* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3096 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Mal1g3096 119 Gene3D Classic Zinc Finger 45 109 - -
Mal1g3096 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
Mal1g3096 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Mal1g3096 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Mal1g3096 119 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3096 3 118 C2H2 Transcription Factor Family AT2G36930 73.276 7.59e-61 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3096 K14821 - zju:107431907 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3096 1 46761367 46764097 Mal1g3096 1 46761367 46764097 ECH