Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3092 ATGCTTAGTTCATTTGTTGGGAAGGTACAAAAGAGTTTATCACTCTTTGTACCAAGAAAGCATGCATTGAGCTATTGGAATGAAGATCATGCCACAACCACAAGTGAGCTTGCCGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGTAGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTGACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAGTATGGTTTTAGACAGAAGGGAACTCTTGTTGTTCCGTGTCGGCCGATCGAATTACAGAACATTCTAGATGGTCGGAAAACATAG 327 0.4098 MLSSFVGKVQKSLSLFVPRKHALSYWNEDHATTTSELADDVMKGYFAVLARKGVETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIELQNILDGRKT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3092 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 107 IPR003676 GO:0009733
Mal1g3092 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Mal1g3092 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3092 Mal-Chr1 46609576 46609902 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3092 27 95 Calmodulin-binding Proteins AT3G43120 42.029 8.50e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3092 - K14488 gmx:100818734 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4222 3 121380266 121380628 Mal1g3092 1 46609576 46609902 PCT