Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3089 ATGCCTAGTTCATTTGTTGAGATTGTACAAAAGAGTTTATCAGTCTTTGTACCAAGAAAGCATGCATTGAGCTATTTGAATGAAGATCATGCAACAACCACAAGTGAGCTTGCCGATGATGTCATGAAAGGCTACTTTGCTGTTCTTGCAAGGAAAGGTGAAGAATCTAGAAGATTTATTGTTGGGTTAGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTGGGAGGAGTATGGTTTCAGACAGAAGGGAACTCTTGTTGTTCCATGTCGGCCGATAGAATTACAGAACATTCTAGATGGACGGAAAGCATAG 327 0.3976 MPSSFVEIVQKSLSVFVPRKHALSYLNEDHATTTSELADDVMKGYFAVLARKGEESRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIELQNILDGRKA* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3089 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 3 107 - -
Mal1g3089 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Mal1g3089 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3089 Mal-Chr1 46508446 46508772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3089 27 95 Calmodulin-binding Proteins AT3G43120 42.029 2.74e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3089 - K14488 gmx:100818734 134.035