Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3088 ATGCTTAGTTCTTTTGTTGGTAAGGTACAAAAGAGTTTGTCACTCTTTGTACCAAGAAAGCATGCATTGAGCTACTGGAATGAAGACCATGCAACAACCACAAATGAGCTTGCCGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAAGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACTGATCCTGCTTTTTTGGGAATGCTTGATGAAGCTTGGGAGGAATATGGTTTCAGGCAGAAGGGAACTCTGGTGGTTCCGTGTCGGCCGATAGAATTACAGAACATTCTAGATGGTCGGAAAATATAG 327 0.4098 MLSSFVGKVQKSLSLFVPRKHALSYWNEDHATTTNELADDVMKGYFAVLARKGEETRRFIVGLDYLTDPAFLGMLDEAWEEYGFRQKGTLVVPCRPIELQNILDGRKI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3088 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Mal1g3088 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 108 - -
Mal1g3088 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3088 Mal-Chr1 46477036 46477362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3088 23 95 Calmodulin-binding Proteins AT3G43120 41.333 1.43e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3088 - K14488 gmx:100818734 142.124