Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3084 ATGGTTCTTTCTTTTGTTGGGAAGATTCAAAGGGGTATTTCACACTTTGTACACAAAAGGCACGATTTCAGTGAAGAGTTAGTGGCAGAGGATGTTCGGGAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGAGAAACCAAAAGATTTATTATTGGCCTAGAGTATTTGAGTGATCCTGAATTTTTGGGACTACTTGATCAAGCTCAGGAAGAGTATGGTTTTATACACAAAGGAGCTATTGCTGTCCCTTGTCTGCCTGAAGAATTACAGAACATTCTACATGGTCAGAGATGA 297 0.3939 MVLSFVGKIQRGISHFVHKRHDFSEELVAEDVREGYFAVVAMKDGETKRFIIGLEYLSDPEFLGLLDQAQEEYGFIHKGAIAVPCLPEELQNILHGQR* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3084 98 PANTHER SMALL AUXIN-UP RNA-RELATED 1 98 - -
Mal1g3084 98 Pfam Auxin responsive protein 26 94 IPR003676 GO:0009733
Mal1g3084 98 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3084 Mal-Chr1 46186944 46187240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3084 13 94 Calmodulin-binding Proteins AT3G43120 38.298 1.58e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3084 - K14488 mtr:MTR_1g063330 187.193