Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3079 ATGGATGATCCCATTGATACACCTGAATGGGAGCCTCCTCCTCCTCCTGCTCCTCCTGTTATCGATCCTCCAAATGCTGGAGCTATTGTTGTAATTCCTCCCGTTCAGGTGCCAGCACCAGTCGTGGAAATTTCTATTGATCATAGGGAGGTATTTACCACCAAAACAAAGTTTCAAACACGGAATGAGTTGATGGATTGGGTTCGCGAAGAAGCCAGGAAGCTTGGATTTTCTGTTGTTATTGGAAAATCCAACAATGGTGGAAACGGAAGAAATGCTTTTGTTACTTTGATATGTGAGAGAGGCGGTACATATACCAAGTACAACAAGTTGCAGAAGCGGAACAAAATTGCAGGGTCGGTGACATGTGGGTGTCTGATTCGCGTGAGAGGTTATTTGTTGATTGGCGGTGATTGGAGCCTTAAAGTCAATGACGGAAAACACAACCATGACATGGCGGAAGTGTTGAAAGGTCATAAAACTGCTGGAAGGCTAAATCCAAATGAAAAGGATATTCTCCGTAACTTGACTGATGCCAATGTTCCTCCAAGACACATTCTCACATCTTTAAGGAAAAGGAACAGCAAAACGGCGACTACCATCAAGCATATCTACAATGCACGTACACGGCATAGGAAGTCAGTTAGGGGTCCTAGATCAGAGATGCATCATTTGATGAAGTTTTTGGTTGAGCATAAGTATGTCTACCATGTTAGGAATTATGCTAATTCCCAAAACATCAAAGATATATTTTGGGCGCATCCGGAATCCATCAAGTTGTTTAACATGTTCCCTGCTGTGTTAATTATAGATTCCACCTATAAGACTAACAAATACCGTCTTCCGTTGCTTGAGTTTGTTGGTGTCACTTCTACCTACTTGACGTATTCTATTGCATTTGCTTATATGATGTCCGAGAAGGAAGAAAACTTCACTTGGGCTCTTGAAAAATGTCGAGGCTTGTTCAAATCTGTGAATATGTCACCCGAAGTCGTTGTCACTAACCGAGACAATGATTTGATGAATGCTGTCGACGAAAACTTCCCAAAGGCCACAACTTTGTTGTGTGAGTATCACATAGGGAAGAATGTTAGAGCGAGATGTAAGACGAATTGCAAAGTGAAGGAAGGGTCAAACATCAAACCCATGGAAGTGGTGAATGCGATAATGGATGTTTGGGAGGCAGTTGTTTTTCTCAAACGGAGCAGAAGTATGTGGATAATTGTATGCGGTTGA 1236 0.4223 MDDPIDTPEWEPPPPPAPPVIDPPNAGAIVVIPPVQVPAPVVEISIDHREVFTTKTKFQTRNELMDWVREEARKLGFSVVIGKSNNGGNGRNAFVTLICERGGTYTKYNKLQKRNKIAGSVTCGCLIRVRGYLLIGGDWSLKVNDGKHNHDMAEVLKGHKTAGRLNPNEKDILRNLTDANVPPRHILTSLRKRNSKTATTIKHIYNARTRHRKSVRGPRSEMHHLMKFLVEHKYVYHVRNYANSQNIKDIFWAHPESIKLFNMFPAVLIIDSTYKTNKYRLPLLEFVGVTSTYLTYSIAFAYMMSEKEENFTWALEKCRGLFKSVNMSPEVVVTNRDNDLMNAVDENFPKATTLLCEYHIGKNVRARCKTNCKVKEGSNIKPMEVVNAIMDVWEAVVFLKRSRSMWIIVCG* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3079 411 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 117 367 IPR031052 GO:0006355
Mal1g3079 411 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g3079 411 Pfam MULE transposase domain 267 363 IPR018289 -
Mal1g3079 411 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 117 367 - -
Mal1g3079 411 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3079 Mal-Chr1 46086681 46087916 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g3079 MULE 4.7e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3079 - - mtr:MTR_1g099140 340.502