Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3072 ATGTCTTCATCAGAACTAGTTATCCACACATTCTCTCAAACCCAATCAGCCACCTCCACCGCCGTAGCCACCACCTCTTCCGATCCAAACACTAAACTCACCATCGTAAGAAAAACCGCCTCTCGATCCACCAAAGACCGCCACACCAAGGTCAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCACTCTGCGCCGCTAGGATTTTCCAGCTGACACGCGAGCTAGGTCACCGTTCCGACGGTGAAACCATCGAGTGGCTTCTCCGTCATGCTGAGCCGTCGATCATCGCTGCTACCGGTACCGGAACTATCCCCGCTGGACCAGTTTCAACTTCTTCTCCGGTTACCTCTTCCTCCGCGCCGTCGGTTTCTTGCCATGTTCAGCCTGCGTCGACTGTTGGTCCCGGCGGTGGGATTTTTGGGATGGCTCTGCCGTTACAGCAGCCGAGCTGCCGTCTTGACCTCTCTCAGCCGGCGGGGATGGATTACGCGGCGGCGAATAGGTACCGTCATATGCCGTTCACGGCGCTGCTTTTGCAACCGACGACGGCAGAGGAGAATCAGCAAGAAGAATCTCTGAATGAACAATGA 591 0.5685 MSSSELVIHTFSQTQSATSTAVATTSSDPNTKLTIVRKTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTIPAGPVSTSSPVTSSSAPSVSCHVQPASTVGPGGGIFGMALPLQQPSCRLDLSQPAGMDYAAANRYRHMPFTALLLQPTTAEENQQEESLNEQ* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3072 196 Pfam TCP family transcription factor 43 147 IPR017887 -
Mal1g3072 196 ProSiteProfiles TCP domain profile. 44 98 IPR017887 -
Mal1g3072 196 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 20 123 - -
Mal1g3072 196 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3072 Mal-Chr1 45690490 45691080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3072 44 183 TCP Transcription Factor Family AT2G37000 57.447 3.07e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal1g3072 TCP 4.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3072 - - cam:101510590 256.144