Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3069 ATGAGGAACTATGTTTCCTACATTGCTCTCTTTTTCTTCTCTTTCACTCTGTTTCCCAGCATTCATTCTGCCCCTTCCTCCTTTTTCACCGATGAAATCTACAAGGAACTTAAGAATATCGCTGTTCTTTTGAATAATGATATTAAATCCAGTTTAAGTTTCTGCATTAAGGATCCGAAAAAAGATTGGGAGGAAGCTTTTGATTTTACGGGAAAGTTGGATTTCGTTGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGGGATCGAATATGTACTGCAGCTGAAATAAGGTACTACTTCCATGGTTTCTTGGCGCAGGGAGGAGCATCATCTGAAAATTATGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGGGTTGTAGTACAGGCAAGAATGTTGACCTAAAAAGGGACACAAAGGAAATTCCAATGAGAACCAAAAACTGTAAACCTTGTTGCGAGGGTTTTTTCTGTCCTCAAGGATTGACTTGTATGATACCTTGCCCCCTAGGTTCTTATTGTCCACTTGCAAAACTGAATAAGCAGACTGGACTATGTGAACCATATAGTTACCAGATACCTCAGGGAGAAACAGATCATACTTGTGGTAGTGCTGATATTTGGTCTGGTGTGGTGAACAATAGTGATATATTCTGTTCTCCCGGATCATACTGCCCAACTACAACACGTAAAGTTTCTTGCGATCGTGGATATTACTGCAGGATGGGTTCTACTCATCAGAATCCATGCTCCAGGTTCAGCCAATGTAATCCAAACACAACAACCCAAAATATGCATGCTTATGGCGCTCTGCTTATTGTTGCATTGAGTACTGTCCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACACGAGAAAGAAGGAAAGCTAAATCCAGAGAAGCTGCAGCAAGACAGGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAGATGGCAAAAGATGCTGCTAAAAGGAATAAGATGGGATTGCAACATCAGCTATCACGCACTTTTTCTCGCAAAAAATCAGTGAAGCAAGGGGAGCAAGCTAATCCTGCTATGAGCAGTTCAGTTTTGCCACCTCCTCCAGGACAGGCATCTGCAGCCATAAAAGGCCAAACAAAGGAACCTAGCAGCCTTACTAAAATGATGAATTCCCTAGAAAATGACCCTAATAGTAATGAAGGATTCAATCTAAAGATTGGGGACAAAAATATTAAAAAGCAGATGCCAAAGGGAAAAAATTTACATACGCAAAGCCAAATTTTAAGATATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAATAACTTGACCTTCTCAGGAGTGATTTCAATGGCCGCTGAAGGTGAGGAGGATATTAGATCGAGGCCTGAGATCGAGGTAGCTTTCAAAGATGTAACCCTTACTTTGAAAGGGAAAAGAAAACATATACTGAGGTGTGTGACGGGTAAAATCTTGCCTGGTCGTGTTTCAGCTGTGATGGGTCCCTCAGGAGCTGGCAAAACTACATTTCTTTCTGCCTTGGTAGGGAAGACAAGAGGATGCACTATGACAGGCTCAATTTTAATCAATGGAAGACCTGAATCCATTCACTGTTATCAGAAAATTGTTGGATATGTGCCGCAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGATGACATGGCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGACTCCAGGCAATAAGAGATTCCCTTGTTGGGACAGTAGAGAGGCGAGGCATATCTGGTGGGCAACGAAAACGTGTAAATGTGGGGTTGGAGATGGTTATGGAGCCGTCATTGTTAATCTTAGATGAGCCTACAACTGGTCTGGACAGTGCATCTTCCTCTTTACTGCTGAGAGCACTTCGTCGTGAAGCTGCTGAAGGGGTGAATGTTTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCAAAAGGTGGTCTTACTGCATATCACGGGCCTGTAAAAAAAGTAGAAGAATACTTTGCTGGCATCGGTATCCCTGTTCCTGATCGTGTGAATCCTCCAGACCATTTTATTGACATTCTGGAAGGTTTAGTGAAACCAAGTGAAGGTGTGACTTATCAACAACTACCTGTCAGATGGATGCTTCATAATGGTTACCCAGTACCACCAGATATGCTTCATTATGCTGATGAAATTTCTGCTTCATCTTCCTCAAAGGCAAATCATGCAAAAAAGGCTTCTGATGACGCTTCTGATCAATCATTTGCCGATGAGTTTTGGGAGGATATGAAAAGTAATGTGCAGTTGCAAAAAGATCATATAGAGGCAACCTTCTTAGCGACTAAGGACTTATCTGGCCGAAGAACGCCTGGTGTAGCTCGGCAGTATAGATACTACCTTGGGCGGGTTGGTAAGCAGCAGCTGCGAGAAGCAAAATCACAAGCAGTTGACTATCTCCTTTTATTAGTTGCTGGTGCTATCTTGGGAACTCTTACTAAAGTAAATGATGAAACATTTGGATCTCTTGGATATACATATACTGTCATTGCTGTTTCTCTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTATGGATAAATTACAATACTGGAGGGAGAGTGCATCAGGGATCAGCAGTCTAGCTCATTTTTTGGCCAAAGATACAATTGATCTTTTCAGTACAATCGTCAAACCTCTCATTTATCTATCCATGTTCTACTTTTTTAGCAATCCAAGGTCAACCTTCGGAAGTAATTATGTGGTTTTGGTATGCCTTGTGTACTGTGTGACTGGCATGGCATACGCATTAGCAATTTATTTTGAGCCTGCTCCTGCTCAGCTGTGGTCAGTGCTTCTCCCTGTTGTTATGACTCTCATTGCAAACCAGACAAGAGATACTACCTTTATGAAGATCCTAATTCAAATGTGTTACCCAAATTGGGCTTTGGAGGCCTTTATTATTGCAAATGCTGAAAGGTACACTGGAGTATGGCTGATAACTCGCTGTAGTTCACTGATGAATAGCGGTTATAACGTCAGTGATTGGCCTATTTGTCTAGCTGTCCTCATTTTTTATGGTATAGTTGCTCGTATTGTGGCCTTCATTTGTCTCATGATCACCCAAAAGAAGTGA 3252 0.4114 MRNYVSYIALFFFSFTLFPSIHSAPSSFFTDEIYKELKNIAVLLNNDIKSSLSFCIKDPKKDWEEAFDFTGKLDFVDSCVKKKGDFRDRICTAAEIRYYFHGFLAQGGASSENYVKPNKNCNLTSWVSGCEPGWGCSTGKNVDLKRDTKEIPMRTKNCKPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNKQTGLCEPYSYQIPQGETDHTCGSADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDRGYYCRMGSTHQNPCSRFSQCNPNTTTQNMHAYGALLIVALSTVLIFIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKMAKDAAKRNKMGLQHQLSRTFSRKKSVKQGEQANPAMSSSVLPPPPGQASAAIKGQTKEPSSLTKMMNSLENDPNSNEGFNLKIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNNNLTFSGVISMAAEGEEDIRSRPEIEVAFKDVTLTLKGKRKHILRCVTGKILPGRVSAVMGPSGAGKTTFLSALVGKTRGCTMTGSILINGRPESIHCYQKIVGYVPQDDIVHGNLTVEENLRFSARCRLSDDMAKPDKVLIVERVIETLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLRALRREAAEGVNVCMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLVKPSEGVTYQQLPVRWMLHNGYPVPPDMLHYADEISASSSSKANHAKKASDDASDQSFADEFWEDMKSNVQLQKDHIEATFLATKDLSGRRTPGVARQYRYYLGRVGKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSMDKLQYWRESASGISSLAHFLAKDTIDLFSTIVKPLIYLSMFYFFSNPRSTFGSNYVVLVCLVYCVTGMAYALAIYFEPAPAQLWSVLLPVVMTLIANQTRDTTFMKILIQMCYPNWALEAFIIANAERYTGVWLITRCSSLMNSGYNVSDWPICLAVLIFYGIVARIVAFICLMITQKK* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3069 1083 ProSitePatterns ABC transporters family signature. 620 634 IPR017871 GO:0005524
Mal1g3069 1083 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 25 1079 - -
Mal1g3069 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 702 IPR027417 -
Mal1g3069 1083 CDD ABCG_EPDR 477 703 - -
Mal1g3069 1083 Pfam ABC-2 type transporter 677 1083 IPR043926 GO:0140359
Mal1g3069 1083 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 479 720 IPR003439 GO:0005524
Mal1g3069 1083 SMART AAA_5 505 697 IPR003593 -
Mal1g3069 1083 MobiDBLite consensus disorder prediction 383 408 - -
Mal1g3069 1083 MobiDBLite consensus disorder prediction 325 408 - -
Mal1g3069 1083 MobiDBLite consensus disorder prediction 325 339 - -
Mal1g3069 1083 Pfam ABC transporter 499 647 IPR003439 GO:0005524
Mal1g3069 1083 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 1079 - -
Mal1g3069 1083 Gene3D - 467 714 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3069 Mal-Chr1 45625133 45636162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3069 506 699 Calmodulin-binding Proteins AT2G36910 27.451 9.63e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3069 - - gmx:100812387 1821.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2819 1 39998605 40005844 Mal1g3069 1 45625133 45636162 ECH
Mal3g4212 3 121265206 121266251 Mal1g3069 1 45625133 45636162 ECH
Mal1g3069 1 45625133 45636162 Mal1g2819 1 39998605 40005844 ECH
Mal1g3069 1 45625133 45636162 Mal1g3069 1 45625133 45636162 ECH
Mal1g3069 1 45625133 45636162 Mal7g2907 7 91931252 91938997 ECH