Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3068 ATGGATCGGGAAGAATATTTGCGGAAGTGTTCCAACATGAAATGCCAAAGAATTCAGGTGAATGAATCATATGTGCCTTCCCTTCAAGATGATGAAATGGAAGTTGAGCATTTGCTTGAAGAGCCTAGAAATGATCATGTTTCATTGGATGGTAGTTTAGCTTCTCATACAGCTTTGAATGACAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTCTTGAATGAGGGATTCCTGGATGATGTTGACATCAATGATCTTGAAGGAACTGATGGTTTCTCAGATGCATGTGGAGGGTATTTCTTGGATTTTGATTTATCTAAAGTTGAGCTACTAGGCTCTGGTGCTTATGAAGATTCACTTTTGGAAAATTCAAATTCAGAAAGTCATTCTCCAGGATTTAGTGGAAGTAGCACTGCTGGTGGGATATCAGAATCAACAAAAGCACCCAATAGTACGCAATCTAAATGCAAAATTGAATCTATAGATGAGACAGTAACCCATGATACACATGGCGTCTTCAGGAGCAATCCAAGTCAACCATCAAGTGTAGATTGCATGTACAACATTTCACTTGATATACAGCATCTGCATGAGTTGAATAATGGTTATCCTTTAGCTGGTGGTTTATTGTCTTGTAAGAAGGAAAGTGTAACTGTTGAAACATGCCAATCTGCTCCACCTAGAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTATATTGAAGAATCTTCAAATTTGAGGTCAAAAGAAAAAATACCAACTGCTGGTGCAAAACTTAAACGGCGGAGTGTGTCAACATGTAATGAACTTCGTATAAAAATTAAAGAACTGAAAAATATTCCATACGATAAGTCTAGTGATGGTAATAGTGATGTGACACTTTCTGAGTTGCAAAGCTGCAAGAAGCATCCGAAGAAAGAGGAACTTGAGTATGACTATGAGCCTTTTTCCTCGGAAGAGTCTGAGGATGAATGTTTGGAATCAAAAAGAGGCAGATCAAAAGATCGCAGAAAGAATCAAAGGATGTGGACAACCGCTGAAGTGATGAAGTTGATTGATGGCATATCTGAATATGGAGTTGGTCGATGGACTGATATACAGAGGATTTTGTTTTCTTCTGAAGGTTACCGAACTCCCACAGATGTCAGGGACAAGTGGCGTAACCTTTTAAGAGCCTGTTCTGCACAGAAATTCAACAAGCAAGAGGATGAGCAAAATGATGAGACTGCCACGCGGTCAATACCTTTCAGTGTGGCATGCCGAGTGCTGGAATTGGCTAAAATTCACCCATACCCAAAGCGACGAAACAAAAAGAGAACTTTCGAGAGCCAAGTTGGCCAAAGAAATTTACGTAGGAAGAAGTGTACTTAG 1374 0.3996 MDREEYLRKCSNMKCQRIQVNESYVPSLQDDEMEVEHLLEEPRNDHVSLDGSLASHTALNDKDDLELEVLDGFLNEGFLDDVDINDLEGTDGFSDACGGYFLDFDLSKVELLGSGAYEDSLLENSNSESHSPGFSGSSTAGGISESTKAPNSTQSKCKIESIDETVTHDTHGVFRSNPSQPSSVDCMYNISLDIQHLHELNNGYPLAGGLLSCKKESVTVETCQSAPPREKRFRKPTQRYIEESSNLRSKEKIPTAGAKLKRRSVSTCNELRIKIKELKNIPYDKSSDGNSDVTLSELQSCKKHPKKEELEYDYEPFSSEESEDECLESKRGRSKDRRKNQRMWTTAEVMKLIDGISEYGVGRWTDIQRILFSSEGYRTPTDVRDKWRNLLRACSAQKFNKQEDEQNDETATRSIPFSVACRVLELAKIHPYPKRRNKKRTFESQVGQRNLRRKKCT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3068 457 Pfam Myb-like DNA-binding domain 344 406 - -
Mal1g3068 457 CDD SANT_TRF 342 392 - -
Mal1g3068 457 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 454 - -
Mal1g3068 457 MobiDBLite consensus disorder prediction 123 156 - -
Mal1g3068 457 SMART sant 340 393 IPR001005 -
Mal1g3068 457 MobiDBLite consensus disorder prediction 435 457 - -
Mal1g3068 457 PANTHER TRF-LIKE 8 8 454 - -
Mal1g3068 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 336 395 IPR017930 -
Mal1g3068 457 Gene3D - 330 443 - -
Mal1g3068 457 MobiDBLite consensus disorder prediction 312 341 - -
Mal1g3068 457 ProSiteProfiles Myb-like domain profile. 336 391 IPR001005 -
Mal1g3068 457 SUPERFAMILY Homeodomain-like 338 406 IPR009057 -
Mal1g3068 457 MobiDBLite consensus disorder prediction 323 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3068 Mal-Chr1 45612808 45617183 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g3068 Myb_DNA-bind_6 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3068 - - gmx:100810255 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3068 1 45612808 45617183 Mal1g3068 1 45612808 45617183 ECH