Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3063 ATGGAGGGAATTACCAATGGCCATGCTGAAGCAACCTTTTGTGTGACCAAAACTGCTGGTGATCCACTCAACTGGGGCGCGGCGGCAGAGTCGTTGATGGGGAGTCATTTAGATGAGGTGAAGCGTATGGTGGAGGAGTATCGTAACCCGGTGGTTAAAATCGGCGGCGAGACACTTACCATTGCTCAGGTGGCTGGAATTGCCTCCCATGATAGTGGTGTTAGGGTTGAGCTTTCAGAGTCGGCGAGGGCCGGGGTTAAGGCAAGTAGTGATTGGGTGATGGATAGCATGAACAATGGTACCGATAGTTACGGTGTTACTACCGGTTTTGGTGCTACTTCTCACCGTAGAACCAAGCAGGGTGGTGCCTTGCAGAAGGAGCTAATTAGATTTTTGAACGCTGGAATATTTGGCAATGGTACAGAATCTAACTGTACACTACCACACACGGCAACAAGAGCTGCAATGCTTGTGAGGATCAACACTCTTCTTCAAGGGTACTCTGGAATTAGATTTGAAATTTTGGAAGCTATCACGAAGCTCCTAAACAACAACATTACACCATGTTTACCACTTCGTGGTACAATCACAGCTTCCGGTGATCTTGTTCCACTTTCTTACATTGCCGGTTTATTAACCGGAAGACCTAACTCCAAGGCCGTTGGACCCTCCGGAGAGATTCTCAATGCCAAAGAAGCTTTTCAACTTGCGGGCATTGGTTCTGATTTCTTTGAATTGCAACCTAAGGAAGGTCTTGCTCTTGTCAATGGAACCGCTGTTGGTTCTGGTTTAGCTTCTATTGTTTTGTTTGAGGCAAATGTACTTGCGGTTTTGTCTGAAGTTATGTCAGCAATTTTCGCTGAAGTTATGCAAGGAAAACCTGAATTCACTGATCATTTGACTCATAAGTTGAAACATCACCCTGGTCAAATTGAAGCTGCTGCTATTATGGAACATATTTTGGATGGAAGCGCTTATGTTAAAGCAGCTAAGAAGTTACATGAGACTGATCCATTACAAAAGCCTAAGCAGGATCGTTATGCACTTAGAACTTCACCTCAATGGCTTGGTCCTTTGATTGAAGTGATAAGATTTTCAACCAAGTCGATTGAGAGAGAGATTAACTCAGTCAATGACAACCCTTTGATCGATGTTTCAAGGAACAAGGCTATACATGGTGGTAATTTTCAAGGAACACCTATTGGAGTTTCCATGGATAACACACGTTTAGCTCTTGCTTCTATCGGTAAACTCATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTTTACAACAATGGGCTGCCTTCGAATCTCACTGCTAGTAGAAATCCAAGTTTGGATTACGGTTTTAAGGGATCTGAAATTGCCATGGCTTCTTATTGTTCTGAGTTGCAATATCTTGCTAATCCCGTCACCACTCATGTTCAAAGTGCTGAGCAACACAACCAAGATGTTAACTCTTTGGGTTTGATTTCCTCTAGAAAAACAAATGAGGCTATTGAGATATTAAAGCTCATGTCTTCGACTTTCTTGATTGCACTTTGTCAAGCAATTGACTTGAGGCATTTGGAAGAGAATCTGAGGAGCGCCGTCAAGAACACTGTAAGCCAAGTTGCTAAGAGAACACTCACAACCGGTGTCAATGGAGAACTTCATCCTTCTAGATTTTGCGAGAAAGATTTACTCAAAGTTGTCGACAGGGAGTATGTGTTTGCCTATGCCGATGATCCTTGTCTAGCTACATACCCTTTGATGCAAAAGCTGAGACAAGTTCTTGTGGATCATGCACTAGTGAATGCCGAAGGAGAGAAGAATTTGAACACATCAATCTTCCAAAAGATTGCAACATTCGAGGATGAGTTGAAGGCTATCTTGCCAAAGGAAGTTGAAAGTGCTAGAACTGCATATGAAAATGGACAATGTGGAATTTCTAACAAGATTAAGGAATGTAGGTCTTATCCATTGTACAAGTTTGTTAGAGAGGAGTTGGGAACAGCATTGCTAACTGGTGAAAAAGTGATATCACCTGGTGAAGAGTGTGACAAATTATTCACAGCTATGTGCCAAGGTAAAATTGTTGATCCACTTATGGAATGTCTTGGAGAGTGGAATGGTGCTCCTCTTCCAATTTGTTAA 2139 0.4245 MEGITNGHAEATFCVTKTAGDPLNWGAAAESLMGSHLDEVKRMVEEYRNPVVKIGGETLTIAQVAGIASHDSGVRVELSESARAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQLAGIGSDFFELQPKEGLALVNGTAVGSGLASIVLFEANVLAVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLRSAVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYADDPCLATYPLMQKLRQVLVDHALVNAEGEKNLNTSIFQKIATFEDELKAILPKEVESARTAYENGQCGISNKIKECRSYPLYKFVREELGTALLTGEKVISPGEECDKLFTAMCQGKIVDPLMECLGEWNGAPLPIC* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3063 712 Gene3D - 525 646 IPR023144 -
Mal1g3063 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Mal1g3063 712 CDD PAL-HAL 57 522 IPR001106 -
Mal1g3063 712 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mal1g3063 712 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 712 - -
Mal1g3063 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 194 210 IPR022313 GO:0016841
Mal1g3063 712 Gene3D - 12 258 IPR024083 -
Mal1g3063 712 Pfam Aromatic amino acid lyase 59 534 IPR001106 -
Mal1g3063 712 Gene3D Fumarase/aspartase (Central domain) 259 707 - -
Mal1g3063 712 SUPERFAMILY L-aspartase-like 21 712 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3063 Mal-Chr1 45564704 45568650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3063 19 712 Monolignol Biosynthesis Gene Families AT2G37040 83.862 0.0 1239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2826 1 40082349 40087971 Mal1g3063 1 45564704 45568650 ECH
Mal3g4204 3 121086910 121089805 Mal1g3063 1 45564704 45568650 ECH
Mal1g3063 1 45564704 45568650 Mal1g2826 1 40082349 40087971 ECH
Mal1g3063 1 45564704 45568650 Mal1g3063 1 45564704 45568650 ECH