Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3058 ATGGTTTCAGTTATATCAAGATCTGTAAGATTTCATGGTGATCTTGAAATGGAGAAATTAAAGGAAATTGAAGAAAATCACATGGAAATGATGGGATATGAGATGAGTAATGAATACAAGCATGGAAAAGATGCTACAAACAAGTTATCATCAAATGGAAGAGAACTTTCAAGAGTTTTTTCTGAAGATTATGATGCAGAAGAAATTTTAGTATTCGATCCTAGAGGACCTAGAATAAATTTATGGAACAAAATATTCTTAGTAGCTTGTTTGATTTCATTAGGCGAACTCATTATCGATTCCTCAAAGATTGCATCAAACTACATGAAAAGAGAATTTTGGTTTGATCTTGTTGCAGCACTACCACTTCCTCAGGTACTCATTTGGGCTGTAATTCCAAATCTAAAGGGGTCAGAAATGATTGCATCAAGGCATGTAGTTCGCCTGGTGTCCATTTTCCAGTACTTATTGAGGCTGTATCTTATTTATCCTCTATCATCTAAAATAACTAAGGCAAGTGGAGTAATGATGGAAAAAGCTTGGGCTGGTGCAGCTTATTATTTGACACTCTATATGCTTGCTAGTCATGTTTTAGGATCTACTTGGTACCTATTATCAATTGAAAGACAGGATGAATGCTGGAAGAAAGCTTGTACACTTCAATATCCACATTGTCAGTATCATTATCTTGATTGCCAAAGCTTAAGTGATCCAAATAGAAATGCTTGGCTTAGATCAAGCAATCTATCAGGTCTATGTGATCAGAACAGTGACTTCTTTCAGTTTGGAATTTTCGCCGATGCTTTGACTTTGGAAATAACTGGCTCAAAGTTCTTAACCAGATACTATTACTGTCTTTGGTGGGGATTGAGGAATCTAAGCTCTTCAGGCGAGAATCTTTTAACAAGTACACATGTTGCAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTTTTTGCACTACTCATAGGCAATATGCAAACTTACCTTCAATCGACCACTATACGGCTGGAAGAGTGGAGAATAAGAAGGACAGATACAGAAAGATGGATGCATCACAGGCAGCTCCCTCGTTACCTGAAGCAAAATGTTCGACGCCATGACCAATTCAGATGGGTTGCTACTCGTGGAGTCGATGAGGAAGCTATTCTCAGAGACCTTCCTGTTGATCTCAGACGTGACATTAAACGCCACCTTTGCCTTAATCTAGTTAGACAAGTACCACTATTTGATCAGATGGATGACAGGATGTTAGATGCAATATGTGAAAGACTAAAACCAACTCTATGCACTCCAGGAACTTGCATAGTTCGTGAATGCGACCCTGTTAACGAAATGCTCTTCATTGTCCGAGGACGCCTAGATTCTTGCACAACCAACGGTGGAAGAACTGGTTTCTTCAACACCTGCAGAATAGGCTCGGGTGACTTCTGTGGCGAAGAGCTTTTACCATGGGCCTTAGACACTCGTCCAACTGCTGTACTTCCGTCATCAACTCGCACGGTGAAAGCCATCACTGAAGTCGAAGCTTTTGCACTCATTGCTGAGGACTTGAAATTTGTTGCAGCACAATTCCGCCGGTTACATAGCAAACAACTGAGACAAACCTTTAGATTCTATTCGCATCAGTGGCGGACATGGGCTGCATGTTTTATACAAGCAGCTTGGTTTCGGTATAAGAGAATGAAAGAGACAAATGAGGTTAAGGAAAAGGAGAATCTTATGATGACATCAAATGTGAAATATTATGGAAATGATGATGCTCAATATTTCTCTGCACCTCTGCAGGTTCCAAAGGGATCAAGTTATTCAATGTATTCTGGAAAACTTGTAGGTAGTCTAAGGAGAGGTAGGAGCATGAGATATGGTTCTGAATTTGATATTCTTGGTGGATTAAGGAAGCCTATTGATCAAGATTTTAATGATGATGATGGTTAA 1950 0.3933 MVSVISRSVRFHGDLEMEKLKEIEENHMEMMGYEMSNEYKHGKDATNKLSSNGRELSRVFSEDYDAEEILVFDPRGPRINLWNKIFLVACLISLGELIIDSSKIASNYMKREFWFDLVAALPLPQVLIWAVIPNLKGSEMIASRHVVRLVSIFQYLLRLYLIYPLSSKITKASGVMMEKAWAGAAYYLTLYMLASHVLGSTWYLLSIERQDECWKKACTLQYPHCQYHYLDCQSLSDPNRNAWLRSSNLSGLCDQNSDFFQFGIFADALTLEITGSKFLTRYYYCLWWGLRNLSSSGENLLTSTHVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHDQFRWVATRGVDEEAILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLCTPGTCIVRECDPVNEMLFIVRGRLDSCTTNGGRTGFFNTCRIGSGDFCGEELLPWALDTRPTAVLPSSTRTVKAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFYSHQWRTWAACFIQAAWFRYKRMKETNEVKEKENLMMTSNVKYYGNDDAQYFSAPLQVPKGSSYSMYSGKLVGSLRRGRSMRYGSEFDILGGLRKPIDQDFNDDDG* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3058 649 Pfam Ion transport protein 82 339 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal1g3058 649 SUPERFAMILY cAMP-binding domain-like 343 535 IPR018490 -
Mal1g3058 649 ProSiteProfiles cAMP/cGMP binding motif profile. 413 498 IPR000595 -
Mal1g3058 649 SUPERFAMILY Voltage-gated potassium channels 74 335 - -
Mal1g3058 649 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 94 - -
Mal1g3058 649 PANTHER PROTEIN CNGC15A 95 646 - -
Mal1g3058 649 Gene3D - 74 337 - -
Mal1g3058 649 Gene3D Helix hairpin bin 341 404 - -
Mal1g3058 649 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 95 646 - -
Mal1g3058 649 SMART cnmp_10 413 544 IPR000595 -
Mal1g3058 649 PANTHER PROTEIN CNGC15A 19 94 - -
Mal1g3058 649 CDD CAP_ED 413 544 IPR000595 -
Mal1g3058 649 Gene3D Jelly Rolls 411 531 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3058 Mal-Chr1 45411956 45416759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3058 95 578 Ion Channels AT2G28260 69.215 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3058 K05391 - gmx:100815543 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3058 1 45411956 45416759 Mal1g3058 1 45411956 45416759 ECH