Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3033 ATGGCAACTGAAGCTTCCATGAATAATAATAACCAAAGAGCTCACACCATTGAAAATAGAGATGATATCTCAATTCAAAAGGGTGTGGCATCATCTGAAATAACTGAGGAACTCCCAAGTGGACAACAAAGAACAAGGGAAAACCTTAGCATAGAGACACCAAAAATAACACATGAAGAAACAAAAGAAGATTTTTTGAGAATAAATATACCTCTAACTCCATCACCAAGAGTGATAGTTTCCCCTTGTACAAGTCCTGGTTATTTCATTGAAAGCAATGAATCCCCAAGTCCCTCTAATTCTAAAAATAGGTCAACTCTTAGAAAAACTTTTATTCCTAAACTCAGTTTCAAATTTAAGAACAGTACTTCTGAGATTGAAAAAGCTGCTTTCCTTGCACTTGAAGTTTCATCTACAGTGCCATCGAAAAAGCCTTTTCTTTCAAGGACATTGTCTCGAATGAAATCGAGAGGGAGGAAAACATCTTCCTTACCTGTATCACCGATTCCTAGTTCAAATCCCGTGTTTGTACATGGAGGGAAAGGTTTTCCTGCAATGGAGAAAGAAATGCAATTACCAATTCATCGTTCCCGGTCTGTTCCTGCATTTACCGAAGACTATACTCCTGTAGGTGGCATGTTTCGTATATTTCGAACAATACCACAATTTAATGAGAAAATTACCACCACAACATCTGCTGCATCTCCAACTGGTGAAAATGTTGAAAGTGAGGATGGAGGTGAAGATATTCCTGAAGAAGAAGCTGTTTGTAGAATTTGTATGGTTGAATTGGGAGAAGGTGCTGATACTTTTAAATTGGAGTGCAGCTGCAAAGGTGAGCTTTCACTAGCACACAAAGAATGTGCTGTTAAATGGTTTGGCATTAAAGGTAATAGGACATGTGATGTGTGCAAGCAAGAAGTTCAGAACTTACCTGTCACTCTTTTAAGACTTCACCAAGCTAACTCACAATTGAGCAGAGGTCACTTAGATGAAACTTCTCAATACAGGGTTTGGCAGGATGCCCCCATTCTTGTCATTGTCAACATGTTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCAAGTTTGGGATCTACTGCTATTGCCATGTCCCTTCCATTTTCTTGTATACTTGGCCTTCTTGCAAGCATGACAGCTACCACCATGGTCAGGAGAAATCATGTATGGATTTATGGAACCATACAGTTTGGTCTGGTGGTTCTTGCTGGACATCTTCTCTACTCATTGACTAAAATGGGACCTGTTTTGGCAATCCTACTAGCTACATTTGCTGGGTTTGGAACCGTAATGTGTGGAACATGTATTCTTATAGAGATCTTGAAATGGAGGAGAAGATGGCTTGCTCAGTTGAATGAACAGAACGGCCACTCCGAGGATGCGATTCCGCCCGATCAATCATCGGCAGCCACTCATCAAGTTCAAATTGATTCTCAACATACTGAGAGTAATGTGGGAAACTCTCCTAGGCAAATGAGCTGA 1506 0.4011 MATEASMNNNNQRAHTIENRDDISIQKGVASSEITEELPSGQQRTRENLSIETPKITHEETKEDFLRINIPLTPSPRVIVSPCTSPGYFIESNESPSPSNSKNRSTLRKTFIPKLSFKFKNSTSEIEKAAFLALEVSSTVPSKKPFLSRTLSRMKSRGRKTSSLPVSPIPSSNPVFVHGGKGFPAMEKEMQLPIHRSRSVPAFTEDYTPVGGMFRIFRTIPQFNEKITTTTSAASPTGENVESEDGGEDIPEEEAVCRICMVELGEGADTFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQANSQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLVSSLGSTAIAMSLPFSCILGLLASMTATTMVRRNHVWIYGTIQFGLVVLAGHLLYSLTKMGPVLAILLATFAGFGTVMCGTCILIEILKWRRRWLAQLNEQNGHSEDAIPPDQSSAATHQVQIDSQHTESNVGNSPRQMS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3033 501 MobiDBLite consensus disorder prediction 151 171 - -
Mal1g3033 501 SMART ringv_2 256 305 IPR011016 GO:0008270
Mal1g3033 501 ProSiteProfiles Zinc finger RING-CH-type profile. 249 311 IPR011016 GO:0008270
Mal1g3033 501 CDD RING_CH-C4HC3_MARCH 257 305 - -
Mal1g3033 501 PANTHER OS02G0165000 PROTEIN 9 496 - -
Mal1g3033 501 MobiDBLite consensus disorder prediction 465 501 - -
Mal1g3033 501 Pfam RING-variant domain 257 304 IPR011016 GO:0008270
Mal1g3033 501 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 9 496 - -
Mal1g3033 501 SUPERFAMILY RING/U-box 253 308 - -
Mal1g3033 501 MobiDBLite consensus disorder prediction 25 50 - -
Mal1g3033 501 MobiDBLite consensus disorder prediction 1 54 - -
Mal1g3033 501 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 312 IPR013083 -
Mal1g3033 501 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3033 Mal-Chr1 44520924 44525408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3033 251 311 C3H Transcription Factor Family AT2G37950 41.935 3.63e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3033 - - gmx:100787963 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3033 1 44520924 44525408 Mal1g3033 1 44520924 44525408 ECH