Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g3032 | ATGCAAATGATTCCTGGTGACCCTTTTTCACTATCCACTTCACTTGGAGGGTTTACTCATCAAGAACAAAACACAAACCCTAACCCTAAACCTAATGGCCCAGCTTCTGTCCCCAAGAAGAAGAGAAATCTTCCAGGAACACCAGATCCAGATGCTGAGGTCATTGCTCTATCACCAAAGACACTCATGGCAACAAACAGATTCATCTGTGAAATATGCAACAAAGGGTTCCAAAGAGATCAAAACCTTCAACTTCATAGAAGAGGACACAATCTTCCATGGAAGCTAAGACAGAGATCCAACAAAGATGTTATTAAGAAGAAAGTTTACATCTGTCCAGAGAAGACTTGTGTGCATCATGACCCTTCTAGAGCACTTGGTGACCTCACAGGTATAAAAAAGCACTTTAGTAGAAAGCACGGTGAAAAGAAGTGGAAATGTGAAAAATGTTCAAAGAAATATGCAGTCCAATCAGATTGGAAAGCTCACACAAAAACATGTGGTACAAGAGAATACAAATGTGACTGTGGCACCCTCTTCTCAAGGAAGGATAGCTTCATTACACATAGAGCTTTTTGTGATGCATTGGCAGAAGAGAGTGCAAGGATAACTTCAGTGACAACAACAAATCTAAATTTCAAGAATGAAGAAGGTAATGGTTCAATGATGGGTTCACTTTCACATCAACATGGAATACTTCAAAATATAGGTGGAATTCCACATCCACAATTTGGTTCACATGGATTTCATCATGTAGATTTCAATGGAATTATGGAGCAACAAAGGCCAAGTTTATCACTTTGGTTAAACCAAGGGAATCATGAAATGGGACAAAGTTCTAATTCACTTTTTGGTTCTTCTGGTTTATCTGAGATAGTTCAAATGGGAAATGCTACAACTACTAATACTAATACTAATAATAATAATAATGGCTTGATTTGTGCTTCTTCATCATCATCAATGTTTGGTATACCTGCTTCAAATTCAACTTCTGCTGCTGCAAATCTTTCTCTATCAAAAACTACTTCTGGTTCTGTTTCTGGTTCTGCTACACCAATGTCAGCTACTGCTCTTCTGCAAAAAGCAGCTCAAATGGGTTCAACTAGAAGCAATACTAGTAATGATAATAATAACAACCCTTCCATTTTTAGTTCTAGTTTTGGTGTAATGACATCACCTTCTTCTTCTACTAGTTCAGCTATGTTGGGAAATAGTACTGCTGCTCCTAATAGCAGTTTTGATCAATTTTTTATGCATGGACCACAAAATGATCAACAAGGAAAATTGAATATTTTGCACCATGGTGGTTCAAACTCTATGGATCAAGTTCAAGTTCAACAAAGTAATTTGACAAGAGATTTTCTTGGTGTGAGTGGTGGAGGAAGAAGTGGTCCTCCTCATTTTCTACCTCAAGAGATAGCAAAATTTGCTTCTTCCATTCAATTCACAAGTAATCAATGA | 1461 | 0.3744 | MQMIPGDPFSLSTSLGGFTHQEQNTNPNPKPNGPASVPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKDVIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARITSVTTTNLNFKNEEGNGSMMGSLSHQHGILQNIGGIPHPQFGSHGFHHVDFNGIMEQQRPSLSLWLNQGNHEMGQSSNSLFGSSGLSEIVQMGNATTTNTNTNNNNNGLICASSSSSMFGIPASNSTSAAANLSLSKTTSGSVSGSATPMSATALLQKAAQMGSTRSNTSNDNNNNPSIFSSSFGVMTSPSSSTSSAMLGNSTAAPNSSFDQFFMHGPQNDQQGKLNILHHGGSNSMDQVQVQQSNLTRDFLGVSGGGRSGPPHFLPQEIAKFASSIQFTSNQ* | 487 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g3032 | 486 | MobiDBLite | consensus disorder prediction | 361 | 389 | - | - | |
Mal1g3032 | 486 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Mal1g3032 | 486 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Mal1g3032 | 486 | Gene3D | Classic Zinc Finger | 123 | 202 | - | - | |
Mal1g3032 | 486 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 70 | 90 | IPR013087 | - | |
Mal1g3032 | 486 | SMART | c2h2final6 | 110 | 140 | IPR013087 | - | |
Mal1g3032 | 486 | SMART | c2h2final6 | 68 | 90 | IPR013087 | - | |
Mal1g3032 | 486 | SMART | c2h2final6 | 145 | 165 | IPR013087 | - | |
Mal1g3032 | 486 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 7 | 479 | - | - | |
Mal1g3032 | 486 | Gene3D | Classic Zinc Finger | 46 | 121 | - | - | |
Mal1g3032 | 486 | Pfam | Zinc-finger double-stranded RNA-binding | 68 | 90 | IPR022755 | - | |
Mal1g3032 | 486 | PANTHER | ZINC FINGER PROTEIN JACKDAW | 7 | 479 | IPR033243 | GO:0003700 | |
Mal1g3032 | 486 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 68 | 90 | IPR013087 | - | |
Mal1g3032 | 486 | SUPERFAMILY | beta-beta-alpha zinc fingers | 67 | 165 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g3032 | Mal-Chr1 | 44507115 | 44509270 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g3032 | 1 | 477 | IDZ Gene Family | AT5G03150 | 49.907 | 5.53e-146 | 426 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mal1g3032 | zf-C2H2_jaz | 7.1e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g3032 | K25870 | - | gmx:100801182 | 575.089 |