Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3032 ATGCAAATGATTCCTGGTGACCCTTTTTCACTATCCACTTCACTTGGAGGGTTTACTCATCAAGAACAAAACACAAACCCTAACCCTAAACCTAATGGCCCAGCTTCTGTCCCCAAGAAGAAGAGAAATCTTCCAGGAACACCAGATCCAGATGCTGAGGTCATTGCTCTATCACCAAAGACACTCATGGCAACAAACAGATTCATCTGTGAAATATGCAACAAAGGGTTCCAAAGAGATCAAAACCTTCAACTTCATAGAAGAGGACACAATCTTCCATGGAAGCTAAGACAGAGATCCAACAAAGATGTTATTAAGAAGAAAGTTTACATCTGTCCAGAGAAGACTTGTGTGCATCATGACCCTTCTAGAGCACTTGGTGACCTCACAGGTATAAAAAAGCACTTTAGTAGAAAGCACGGTGAAAAGAAGTGGAAATGTGAAAAATGTTCAAAGAAATATGCAGTCCAATCAGATTGGAAAGCTCACACAAAAACATGTGGTACAAGAGAATACAAATGTGACTGTGGCACCCTCTTCTCAAGGAAGGATAGCTTCATTACACATAGAGCTTTTTGTGATGCATTGGCAGAAGAGAGTGCAAGGATAACTTCAGTGACAACAACAAATCTAAATTTCAAGAATGAAGAAGGTAATGGTTCAATGATGGGTTCACTTTCACATCAACATGGAATACTTCAAAATATAGGTGGAATTCCACATCCACAATTTGGTTCACATGGATTTCATCATGTAGATTTCAATGGAATTATGGAGCAACAAAGGCCAAGTTTATCACTTTGGTTAAACCAAGGGAATCATGAAATGGGACAAAGTTCTAATTCACTTTTTGGTTCTTCTGGTTTATCTGAGATAGTTCAAATGGGAAATGCTACAACTACTAATACTAATACTAATAATAATAATAATGGCTTGATTTGTGCTTCTTCATCATCATCAATGTTTGGTATACCTGCTTCAAATTCAACTTCTGCTGCTGCAAATCTTTCTCTATCAAAAACTACTTCTGGTTCTGTTTCTGGTTCTGCTACACCAATGTCAGCTACTGCTCTTCTGCAAAAAGCAGCTCAAATGGGTTCAACTAGAAGCAATACTAGTAATGATAATAATAACAACCCTTCCATTTTTAGTTCTAGTTTTGGTGTAATGACATCACCTTCTTCTTCTACTAGTTCAGCTATGTTGGGAAATAGTACTGCTGCTCCTAATAGCAGTTTTGATCAATTTTTTATGCATGGACCACAAAATGATCAACAAGGAAAATTGAATATTTTGCACCATGGTGGTTCAAACTCTATGGATCAAGTTCAAGTTCAACAAAGTAATTTGACAAGAGATTTTCTTGGTGTGAGTGGTGGAGGAAGAAGTGGTCCTCCTCATTTTCTACCTCAAGAGATAGCAAAATTTGCTTCTTCCATTCAATTCACAAGTAATCAATGA 1461 0.3744 MQMIPGDPFSLSTSLGGFTHQEQNTNPNPKPNGPASVPKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKDVIKKKVYICPEKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARITSVTTTNLNFKNEEGNGSMMGSLSHQHGILQNIGGIPHPQFGSHGFHHVDFNGIMEQQRPSLSLWLNQGNHEMGQSSNSLFGSSGLSEIVQMGNATTTNTNTNNNNNGLICASSSSSMFGIPASNSTSAAANLSLSKTTSGSVSGSATPMSATALLQKAAQMGSTRSNTSNDNNNNPSIFSSSFGVMTSPSSSTSSAMLGNSTAAPNSSFDQFFMHGPQNDQQGKLNILHHGGSNSMDQVQVQQSNLTRDFLGVSGGGRSGPPHFLPQEIAKFASSIQFTSNQ* 487
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3032 486 MobiDBLite consensus disorder prediction 361 389 - -
Mal1g3032 486 MobiDBLite consensus disorder prediction 1 51 - -
Mal1g3032 486 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g3032 486 Gene3D Classic Zinc Finger 123 202 - -
Mal1g3032 486 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Mal1g3032 486 SMART c2h2final6 110 140 IPR013087 -
Mal1g3032 486 SMART c2h2final6 68 90 IPR013087 -
Mal1g3032 486 SMART c2h2final6 145 165 IPR013087 -
Mal1g3032 486 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 479 - -
Mal1g3032 486 Gene3D Classic Zinc Finger 46 121 - -
Mal1g3032 486 Pfam Zinc-finger double-stranded RNA-binding 68 90 IPR022755 -
Mal1g3032 486 PANTHER ZINC FINGER PROTEIN JACKDAW 7 479 IPR033243 GO:0003700
Mal1g3032 486 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 90 IPR013087 -
Mal1g3032 486 SUPERFAMILY beta-beta-alpha zinc fingers 67 165 IPR036236 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal1g3032 Mal-Chr1 44507115 44509270 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3032 1 477 IDZ Gene Family AT5G03150 49.907 5.53e-146 426
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g3032 zf-C2H2_jaz 7.1e-05 CL0361
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3032 K25870 - gmx:100801182 575.089
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3032 1 44507115 44509270 Mal1g3032 1 44507115 44509270 ECH
Mal3g4182 3 120643659 120645904 Mal1g3032 1 44507115 44509270 PCT