Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3023 ATGGGTAAGAAAAAGTCTGAGGATGCAGGACCATCTATAAAGGCGAAACCAGGTAGCAAAGATGTTTCTAAGAAGGAAAAAATTTCTGTCTCTGCAATGTTGGCAAGTATGGATGAAAAAGCTGATAAGCCTAAAAAAGTATCTTCTTCAAATAAGCCGAAGCCAAAACCTGCTCCGAAAGCTTCTGCATACACTGATGATATTGATCTTCCTCCCTCTGATGATGATGAATCGGAAGAGGAGCTAGAACAAAAGCATAGGCCTGACGTGAAGCCACTTGAGGTGTCTATAGCTGAAAAAGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAAGAAGCTCTTAGAGATGATCATGATGCTTTCACTGTTGTCATTGGAAGTCGGGCTTCGGTTCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACAATAGAAAATTTTTCTGTGTCTGCTCGTGGTAAAGAACTTCTGAAGAATGCATCAGTGAAGATATCTCATGGAAAACGGTATGGTTTGGTTGGGCCGAATGGAATGGGAAAGTCAACACTTTTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAGGAGGTAGTTGGTGATGATAAAACGGCGCTTGAAGCCGTTGTTTCAGCTAATGTTGAACTAGTTAAAGTTCGTCAAGAAGTTGCTGATCTACAAAATGCAGCTTCTGCTGAAGAAGGTGTGGATAAAGACGATACTGATGCAGAAGAGGATGCGGGAGAAAAGCTAGCGGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCATCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGATATGCAGGGCCGTCCGACAAAATCCTTTAGTGGGGGCTGGAGGATGAGAATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCCACTCTATTATTGCTCGATGAACCCACTAATCATCTTGACCTGAGGGCTGTTCTCTGGTTAGAAGAGTACTTGTGTCGCTGGAAGAAAACTTTGGTGGTTGTATCACACGATAGAGATTTCCTCAATACAGTATGCTCTGAAATTATTCACTTGCATGATTTCAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAACGTCGTAGGGAGGTGAATAAGAAGTATGAGGTTTATGACAAGCAATTGAAAGCAGCTAGAAGGACTGGAAACAAGGCTCAACAAGATAAGGTGAAGGATCGAGCTAAGTTTGCAGCAGCTAAGGAGGCATCGAAAAGCAAAAGTAAGGGAAAGGTTGATGAGGATGAGGCCCAAGTTGAGGTACCACACAAGTGGAGAGACTACAGCGTGGAGTTCCACTTTCCTGAACCTACTGAGCTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTTAGCTATCCAAACCGGGAGGATTTCAGACTCTCTGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATCGTTGGACCTAATGGTGCTGGAAAATCTACACTTCTAAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTAACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTACATCCAGACCAGGAGGGACTTAGTAAGCAAGAGGCTGTCCGTGCAAAACTTGGTAAATTTGGGCTACCTAGTCATAACCATCTTACCCCCATTGTCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTATTCACGTCGATATCCATGTCAAAACCTCATATTTTATTGTTAGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCATTGGCTGATGCGCTGGACGAATTCACTGGTGGAGTTGTTCTTGTTAGTCACGATTCTAGATTGATATCACGTGTCTGTGAGGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACTGTCAGAAATTTCCCTGGAACATTTGAGGATTACAAGGATGATTTGCTGAAAGAGATTAAAGCTGAAGTTGATGACTGA 2148 0.4269 MGKKKSEDAGPSIKAKPGSKDVSKKEKISVSAMLASMDEKADKPKKVSSSNKPKPKPAPKASAYTDDIDLPPSDDDESEEELEQKHRPDVKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDHDAFTVVIGSRASVLDGDDGADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELVKVRQEVADLQNAASAEEGVDKDDTDAEEDAGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDFKLHFYRGNFDAFESGYEQRRREVNKKYEVYDKQLKAARRTGNKAQQDKVKDRAKFAAAKEASKSKSKGKVDEDEAQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRNFPGTFEDYKDDLLKEIKAEVDD* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3023 715 Pfam ABC transporter 505 640 IPR003439 GO:0005524
Mal1g3023 715 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 715 - -
Mal1g3023 715 CDD ABCF_EF-3 155 386 - -
Mal1g3023 715 Gene3D - 152 437 IPR027417 -
Mal1g3023 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 415 IPR027417 -
Mal1g3023 715 SMART AAA_5 514 690 IPR003593 -
Mal1g3023 715 SMART AAA_5 179 385 IPR003593 -
Mal1g3023 715 Coils Coil 231 251 - -
Mal1g3023 715 PANTHER - 5 715 - -
Mal1g3023 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 713 IPR003439 GO:0005524
Mal1g3023 715 Coils Coil 405 425 - -
Mal1g3023 715 Gene3D - 450 714 IPR027417 -
Mal1g3023 715 CDD ABCF_EF-3 488 690 - -
Mal1g3023 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 701 IPR027417 -
Mal1g3023 715 MobiDBLite consensus disorder prediction 1 91 - -
Mal1g3023 715 ProSitePatterns ABC transporters family signature. 313 327 IPR017871 GO:0005524
Mal1g3023 715 Pfam ABC transporter 170 341 IPR003439 GO:0005524
Mal1g3023 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 409 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3023 Mal-Chr1 44282765 44284912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3023 488 691 Calmodulin-binding Proteins AT2G36910 29.148 4.16e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3023 K06184 - gmx:100806865 1170.61