Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3012 ATGGGGAAGAATAAGCCCAATTGGTTTTCCAATGTAAAGAAAGCTCTTAGCCCTGATTCTAAGGAAAACAAACACCAGAATTCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTACACACCCTAAACTCAAATCCAGAAACTGATCAAGCATTAGCACCTCCTTCTCATTCACCTGAGGAGGAGATTGTTTTAACTCATGTTGAGAATGAAAACAATCATGATCATGTTGAAGTTGTAGCAGATGTGGATGTGGATGCTGAGGTGCCTGTTCCTGTTGTTCGGACAGAAACTGTTGACGTTCAAGCCAATCCAATTGTTCAGCTGCCCAGTAAACCGAATTATGAAGTTGCGGCAATCATGATTCAAACCGCTTTTCGGCGATACTTGGCAAGAAGAGCATTTCGGGCTTTAAGGGGGCTGAACAGGTTGAGAGCATTGATGGAAGGTCCAGTGGTGAAACGTCAAGCCGTTAGTACCCTTCGCTCTATGCAGACTTTAGGTCATGTGCAATCCCAGATTCGTTCGAGGCGGGTCAGGATGTTAGAGGAGACTCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAGCTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCCTACAATCAAGAGAGCAAATTGAAGCCAAGTTACTAAGCAAATACGAGGCTACTGTGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAACGGGAGGAATTCATCGAAATCTATTAATCCATTGTTCATGGATCCAACCAATCCTGCTTGGGGATGGAGCTGGTTGGAACGTTGGATGACAGCCAACCAAAGTCTGATGGAAAAAGAGAAGAACAACAATTCATCTGCAAAAAGTTCAAGCCGCAGCATTACCAGTGCTGAAATCCGCAAGTCATTTGCTCGATTCCAGCTCAATTCCGAAAATCATTCTCCAACAGCAAGCCAAAATCCGGGCTCGCCTAACTTCCAGTCCAATTCAAAGCCTCCCAAGCCAGCTATTGGTAAGAAATTGAATAAGGCAAGCCCAAAGGAGAGCTTTATTATGGATGATGACACCAAAAGCATGACGAGTGTGCAGTCAGAGCGAGTCCGGAGGAGGCACTCCATTGCTGGATCAATAGTGAGGGATGATGAAAGCCTTGCAAGCTCTCCATCAATTCCAAGTTACATGGTGCCAACTAAATCTGTAAAAGCTAAATCTAGGTTGCAAAGTCCATTAGCTGCAGAGAATGGAACACCAGAGAAAGGGTCCTTTGGAAATGCAAAGAAACGGCTTAATTTCCCGGCTTCACCTGCCAGATCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTAAATTCAGAAATTACTGTTGGCAATGGTGTGACTGTTTGA 1410 0.4411 MGKNKPNWFSNVKKALSPDSKENKHQNSSGSKKKWFGKKKLHTLNSNPETDQALAPPSHSPEEEIVLTHVENENNHDHVEVVADVDVDAEVPVPVVRTETVDVQANPIVQLPSKPNYEVAAIMIQTAFRRYLARRAFRALRGLNRLRALMEGPVVKRQAVSTLRSMQTLGHVQSQIRSRRVRMLEETQALQKQLLQKHTKELEIQIGEEWDESLQSREQIEAKLLSKYEATVRRERAMAYSFTHQKNGRNSSKSINPLFMDPTNPAWGWSWLERWMTANQSLMEKEKNNNSSAKSSSRSITSAEIRKSFARFQLNSENHSPTASQNPGSPNFQSNSKPPKPAIGKKLNKASPKESFIMDDDTKSMTSVQSERVRRRHSIAGSIVRDDESLASSPSIPSYMVPTKSVKAKSRLQSPLAAENGTPEKGSFGNAKKRLNFPASPARSRRHSGPPKVESSLNSEITVGNGVTV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3012 469 Gene3D iswi atpase 116 151 - -
Mal1g3012 469 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 464 - -
Mal1g3012 469 SMART iq_5 116 138 IPR000048 GO:0005515
Mal1g3012 469 MobiDBLite consensus disorder prediction 451 469 - -
Mal1g3012 469 MobiDBLite consensus disorder prediction 317 338 - -
Mal1g3012 469 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Mal1g3012 469 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Mal1g3012 469 PANTHER IQ-DOMAIN 5-RELATED 5 464 - -
Mal1g3012 469 MobiDBLite consensus disorder prediction 1 60 - -
Mal1g3012 469 MobiDBLite consensus disorder prediction 317 469 - -
Mal1g3012 469 MobiDBLite consensus disorder prediction 352 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3012 Mal-Chr1 44018418 44022042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3012 1 467 IQD Protein Family AT5G03040 51.042 5.02e-130 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3012 - - gmx:100799058 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3012 1 44018418 44022042 Mal1g3012 1 44018418 44022042 ECH
Mal3g4166 3 120396078 120398872 Mal1g3012 1 44018418 44022042 PCT