Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3002 ATGGTACGCTTCTCTTCCGCGCAGCGCCTTGTTTACGCACTCTGCTCCTCCTCCGCCACCACGGTGGGGTCCCTGATCGGCGGCAGTTTCCACCCCCGACACTTCTTCTCAGCGGGGAACGTGGCTCGTGCGACGGCGGTGACAATCGACAAAGAGCCTTGGTGGAAGGAGTCGATGGAAAAGGTTCGCAATATCGGGATCTCGGCGCACATCGATTCCGGGAAGACAACTTTGACGGAGCGGATACTGTTCTACACTGGTCAGATCCACCAGATACACGAGGTTCGCGGGAATGATGGCGTTGGTGCGAAGATGGATGGTATGGATATAGAGAGAATGAGGGGAATAACTATTAAGTCTGCTGCTACTTATTGCAATTGGAAAGGCTCTAAGATCAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGGGCTTTGCGAGTTCTTGATGGCGCCATTCTTGTTCTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATTACTGTTGATCGCCAAATGAGAAGATACGAGGTTCCGAGAATTATATTTATCAACAAGCTTGATCGAATGGGAGCAGATCCATGGAAAGTTATAAACCAGGTTAGATCTAAGCTTCGCCATCATACTGCTGCAGTTCAACTTCCAATATTTCTTGAAGAAGATGATTTCACGGGACTTATTGATCTTGTCAAGTTAAAGGCCTATTATTTTCATGGTACATATGGCGAGAAAATGGTTGTTGAAGAAGTGCCTTCAAACATGGAAGCTTTGGTGGCAGATAAAAGACGCGAACTCATAGAAGCCGTGTCAGAGGTTGATGATATACTTGCCGAAGCTTTTCTTGGCAACGAGACCATTTCAAATGCTGATCTTGAGGGAGCGATTCGCAGGGCTACCATAGCACGGAAATTTATACCGGTATTCATGGGCAGTGCTGTCAAAAACATGGGGGTACAACCACTTATGGATGGCGTACTTAGTTATTTGCCTTGTCCAATTGAAGTTAGTAGTTATGCTCTTGATCAATCTAATAATGAGGAGAAGGTTCAGCTAACTGGAAGTCCGGATGGTCCTCTTGTAGCATTGGCTTTCAAGTTGGAGGACACGTCGGTTGGTCAGTTAACATATCTAAGAATTTACGAGGGCGTCATTCGTAAGGGTTATTTCATTGTTAATGTTAACACGGGCAAGAAGATAAGAGTTCCTCGTCTTGTTCAAATGCATTCTACTGAGATGCATGACATTGAAGAGGCCTGTGCTGGCCAAATAGTTGCTGTATTTGGTGTTGTTTGTGCATCAGGAGATACTTTTACCGATGGGTCAATTAAATACACAATGACTTCCATGACTGTTCCTGAACCCGTGATGTCATTAGCTGTACAACCAGTCTCAAGAGATCTTGGAGGGAAATTTTCAAAAGCTTTGAATCGCTTCCAAAGAGAGGATCCTACTTTCCGCGTTGGCTTGGACCCAGAGAGTGGGCAGACAATCATCTCTGGAATGGGAGAACTGCACTTAAATATTTATGTTGAACGCATTAGGATGGAGTACAATGTTGCTGCATTAGTTGGAAAGCCCCGTGTAAACTTCAGGGAAACTGTTACTCAACGTGTTGATTTTGACTATTTACATAAGAAGCAATCTGGAGGGCAAGGGCAATATGGACGGGTGATTGGGTATATTGAACCACTTCCTGCTGGGTCAGTGACCAAGTTTGAATTTGAAAACATGCTTGTTGGTCAAGCTATTCCGTCAAATTTTGTCCCTGCAATTGAGAAAGGTTTTAAAGAAGCTGCCAACTCTGGTGCCTTAATCGGACACCCGGTTGAAAATATCCGAGTTGTTCTAACAGATGGTGCTGCTCATGCTGTTGATTCCAGTGAACTTGCCTTTAAGTTGGCTTCTATCTATGCTTTTAGGCAGTGTTATCCAGCTTCCAAACCAGTTATATTAGAACCTGTTATGCTTGTTGAACTGAAAGTACCAACAGAATTTCAGGGAGCTGTTATTGGTGACCTCAACAAGAGAAAATGTGTAATTGTTGGCAATGATCAGGACGAAGAAGATTCCGTCATTACAGCACATGTCCCCCTTAACAATATGTTTGGGTATGCTACAACTCTTCGATCGATGACACAAGGGAAGGGTGAATTCACAATGGACTACAAGGAACATTCACCTGTTTCTGATGATACCCAGAGACAATTGATAAACACATACAAGGGCAATAAAGCGGTTGAATGA 2259 0.4418 MVRFSSAQRLVYALCSSSATTVGSLIGGSFHPRHFFSAGNVARATAVTIDKEPWWKESMEKVRNIGISAHIDSGKTTLTERILFYTGQIHQIHEVRGNDGVGAKMDGMDIERMRGITIKSAATYCNWKGSKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRIIFINKLDRMGADPWKVINQVRSKLRHHTAAVQLPIFLEEDDFTGLIDLVKLKAYYFHGTYGEKMVVEEVPSNMEALVADKRRELIEAVSEVDDILAEAFLGNETISNADLEGAIRRATIARKFIPVFMGSAVKNMGVQPLMDGVLSYLPCPIEVSSYALDQSNNEEKVQLTGSPDGPLVALAFKLEDTSVGQLTYLRIYEGVIRKGYFIVNVNTGKKIRVPRLVQMHSTEMHDIEEACAGQIVAVFGVVCASGDTFTDGSIKYTMTSMTVPEPVMSLAVQPVSRDLGGKFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLNIYVERIRMEYNVAALVGKPRVNFRETVTQRVDFDYLHKKQSGGQGQYGRVIGYIEPLPAGSVTKFEFENMLVGQAIPSNFVPAIEKGFKEAANSGALIGHPVENIRVVLTDGAAHAVDSSELAFKLASIYAFRQCYPASKPVILEPVMLVELKVPTEFQGAVIGDLNKRKCVIVGNDQDEEDSVITAHVPLNNMFGYATTLRSMTQGKGEFTMDYKEHSPVSDDTQRQLINTYKGNKAVE* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3002 752 Gene3D Translation factors 345 462 - -
Mal1g3002 752 CDD mtEFG1_C 657 734 IPR035649 -
Mal1g3002 752 CDD EF-G 64 337 - -
Mal1g3002 752 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 4 752 - -
Mal1g3002 752 TIGRFAM small_GTP: small GTP-binding protein domain 61 212 IPR005225 GO:0005525
Mal1g3002 752 Gene3D - 51 340 IPR027417 -
Mal1g3002 752 SUPERFAMILY EF-G C-terminal domain-like 654 746 IPR035647 -
Mal1g3002 752 SUPERFAMILY EF-G C-terminal domain-like 456 533 IPR035647 -
Mal1g3002 752 Pfam Elongation factor G C-terminus 655 740 IPR000640 -
Mal1g3002 752 Pfam Elongation Factor G, domain III 456 529 IPR041095 -
Mal1g3002 752 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 106 121 IPR031157 -
Mal1g3002 752 Hamap Elongation factor G [fusA]. 58 745 IPR004540 GO:0003746|GO:0005525|GO:0006414
Mal1g3002 752 Pfam Elongation factor Tu GTP binding domain 61 335 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 SMART EFG_C_a 654 741 IPR000640 -
Mal1g3002 752 Pfam Elongation factor G, domain IV 531 651 IPR005517 GO:0005525
Mal1g3002 752 CDD mtEFG1_II_like 364 444 - -
Mal1g3002 752 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 60 338 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 4 752 IPR045044 -
Mal1g3002 752 SMART EFG_IV_2 532 652 IPR005517 GO:0005525
Mal1g3002 752 SUPERFAMILY Translation proteins 302 454 IPR009000 -
Mal1g3002 752 Gene3D - 537 742 IPR014721 -
Mal1g3002 752 SUPERFAMILY Ribosomal protein S5 domain 2-like 531 653 IPR020568 -
Mal1g3002 752 CDD EFG_III 457 532 IPR009022 -
Mal1g3002 752 PRINTS GTP-binding elongation factor signature 64 77 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 PRINTS GTP-binding elongation factor signature 133 143 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 PRINTS GTP-binding elongation factor signature 185 194 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 PRINTS GTP-binding elongation factor signature 149 160 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 PRINTS GTP-binding elongation factor signature 113 121 IPR000795 GO:0003924|GO:0005525
Mal1g3002 752 TIGRFAM EF-G: translation elongation factor G 58 745 IPR004540 GO:0003746|GO:0005525|GO:0006414
Mal1g3002 752 Gene3D - 658 728 - -
Mal1g3002 752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 335 IPR027417 -
Mal1g3002 752 CDD EFG_mtEFG1_IV 535 652 IPR005517 GO:0005525
Mal1g3002 752 Pfam Elongation factor Tu domain 2 377 443 IPR004161 GO:0005525
Mal1g3002 752 Gene3D Elongation Factor G (Translational Gtpase), domain 3 463 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3002 Mal-Chr1 43886375 43888633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3002 62 721 Eukaryotic Initiation Factors Gene Family AT1G56070 25.031 2.66e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3002 K02355 - gmx:100783315 1246.88