Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2990 ATGAACTCCAACAATTCTCACTCAATGGCAGCACCAACATTAACACCAACTAGTGGTGTTGATGCTTCTGGTAAGAAGGTTAGAAAGCCTTACACAATTACCAAGTCAAGGGAAAGCTGGTCTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAATTATTTGATAGAGATTGGAAGAAGATTGAAGATTTTGTAGGCTCTAAAACAGTTATTCAGATTCGAAGTCATGCCCAAAAATACTTCTTAAAGGTTCAAAAGAATGGAACACTGGCTCATGTCCCTCCTCCTCGTCCTAAGCGCAAAGCTATTCATCCTTATCCACAAAAAGCAACAAAAAATGTTTTGGTGCCACTACCAGCATCCTTTGCTTATGGATCTTCCACAAATACCCTTGTACCTGCAGGGTATGTCACATGGGATGAAACCTCCATGCTGATGAATACTTGTCAAGATGAACTCAACATTCTTCATGGAAATGAAGCTGATATTGGATCAAAGGGGATCAGCAACAGCGGTCTTAGTGGTGTTGAAGACTCTAATACAAGGCTACCTACTTCTCAAATACCAAATCAAGGGACACAAAATCCCGTGATTCATGGTTTGCCAGACTTTGCTGAAGTTTACGGTTTCATTGGAAGTGTTTTTGATCCGGATACAAACGGTCATGTACAGAAGCTGAAGGAAATGGACCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTAATTTTGATCCCATTAAGGCAATGTCAACATATGATGAGAATAACGACGATCCAGGAGTTACTGAAGTGAAGAAGCAGACAAATGATGTATCATGTCAAACCACTTGA 864 0.3981 MNSNNSHSMAAPTLTPTSGVDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNVLVPLPASFAYGSSTNTLVPAGYVTWDETSMLMNTCQDELNILHGNEADIGSKGISNSGLSGVEDSNTRLPTSQIPNQGTQNPVIHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKAMSTYDENNDDPGVTEVKKQTNDVSCQTT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2990 287 SMART sant 36 84 IPR001005 -
Mal1g2990 287 Pfam Myb-like DNA-binding domain 37 82 IPR001005 -
Mal1g2990 287 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g2990 287 PANTHER SWI/SNF COMPLEX-RELATED 8 281 - -
Mal1g2990 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Mal1g2990 287 PANTHER PROTEIN REVEILLE 8 8 281 - -
Mal1g2990 287 Gene3D - 40 87 - -
Mal1g2990 287 CDD SANT 39 82 IPR001005 -
Mal1g2990 287 MobiDBLite consensus disorder prediction 1 26 - -
Mal1g2990 287 MobiDBLite consensus disorder prediction 265 287 - -
Mal1g2990 287 ProSiteProfiles Myb-like domain profile. 32 82 IPR001005 -
Mal1g2990 287 ProSiteProfiles SANT domain profile. 35 88 IPR017884 -
Mal1g2990 287 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Mal1g2990 287 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 84 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2990 Mal-Chr1 43711072 43715936 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g2990 Myb_DNA-binding 4.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2990 - - gmx:100797466 433.335