Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2979 ATGACAAGGGGTATCCAGATGAGTGTTGATGGTGACAGTAAAGAACTTACTCAGCGTTTGCGGGAAGGGAAGAAAAACTTAAATGAAGGAGTTGCTGGTGAGGATGATGAAGTGAAATGTAACGGAGTGGCTGAACGAGTTAAGGTTGGAGATGGAGGGAATGGCGAATCCTCTTCTGTCCAGCAGCAAGTACCGCAGCAACAGTCTCAAGGGGCAATTATTTGTTGGGAGAGGTTTTTACATATTAGATCGCTTAAGGTCTTGCTTGTGGAGTATGATGACTGTACGCGCCATATTGTCACTGCATTGCTTCACAATTGTAGTTATGAAGTTATTGAGGCAGCAAATGGATTGCAAGCTTGGAAGATTTTGGAGGATTTAACCAATCATATTGATCTTATTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGCTCTTCTGTATAAGATTATGGGCCACCCAACACGGAAAAATATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTCGACTTTCTAGTTAAACCCATACGGAAAAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGTCATAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAATCTGTGAAATCAAAGAGTTTTGAGAAGTTTGACAACAATTCGGGAAGCAATGATGATCAAGACAATGGAAGTTTAGGCTTGAATAATGGGGATGGTAGTGACAATGGTAGTGGCACTCAGAGCTCCTGGACCAAACGAGCTGTAGAAGTTGACAGTCCTAAATCAGGCTCTCAGTGGGATCAGATAACCGAGTGTCCCGACAGCACTTGTGCTCAAGTTGTTCACTCCAATGCTGAAATATGCAAGAACAAGACGATTCCTCCGGTCATAAAGGAGTGTCCAGAGCAAAAGGATCAAATAGGTTCAAAACATATCAACACACTTGATGTGGGCCCCTCTAAGTTCAATGATCAAATTAGTAGAGGACAGCTGGACCTTAATTGTGAGAGTCAATCTGGCAAGCTAAGATGCAAAGTGCTTTCATTATCTGATGTAGTTACTAGCACTTCTGATTCCCATATGGAAAACAGAGAAATTGAAGCCCTAAATAGAAGACCCAAGTTCTCAGATATTGATAACAAAGGTACTAATAATGATGAGGAGTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCCTAGAGAAGTTAAAGAAGCTGGTACGACAGTTCAGGATGAACGGAATATTTTAAGACGTTCTGATCTGTCTGCTTTCTCAAGGTACAATGCTGCCTTTAATGCTAAGAAGTCTCCCACCGGATGTGTTGGAAGCAACTCTCCTCCTAATAACAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATGTTCAATCTCATTCTAGTGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACATTGATATGGATTCTACTACTAATAATGCTTTTACCAAATCAGCAGTTATAAGTGAGCCAGCAGAGGCATCAACAACAAAAAAATTGTACCAAACATCTGCTTTCCAGCCCATAAAAAACAACCTCATGTGTACCTCTCAACAAGTTGTCTCACATAATAAGGAAGATACGACAACAACAATCCTGGCACCACCTAAAATTGACAAGGGTTCTGCTACTCAGGATTTCCATCACCATTATGAAAACCACAACAATGTTGCTAATATGCAGCACCAGTTGCCACCTGAGCATGATGCTGAATCTTTAAAGAAAATGACCGCTGTTGCTCCACACTGCGAGTCATCAAATGTGGTCGAAGTGCTAGTTGAAGGTAATATGGAAAATTACAGTATCAATAGAAGTGCTTCAGGAAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCGCTGCAATTAATGCTGGAGGGACAAACATAGACAGCAACAATGGACTCGCTGGGAATAGTGGCAGTGGTGATGCTAGTGGGAATGGAAGTGCCAGCAGAGTATATCAAAACAAGAATTCTCAAAGGGAAGCAGCCCTAATTAAATTTCGCCAAAAAAGAAAGGAGAGAAAAGAGAGATGCTTTCATAAACAGGTTCGATATCAGAGCAGACAGAAATTAGCTGAACAACGACCCCGATATCGAGGGCAATTTGTGCGACAGTCCTCGAACGATAATCCAAGTGAGGCAACAGATAGTTAA 2238 0.4173 MTRGIQMSVDGDSKELTQRLREGKKNLNEGVAGEDDEVKCNGVAERVKVGDGGNGESSSVQQQVPQQQSQGAIICWERFLHIRSLKVLLVEYDDCTRHIVTALLHNCSYEVIEAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIALLYKIMGHPTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSFEKFDNNSGSNDDQDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKSGSQWDQITECPDSTCAQVVHSNAEICKNKTIPPVIKECPEQKDQIGSKHINTLDVGPSKFNDQISRGQLDLNCESQSGKLRCKVLSLSDVVTSTSDSHMENREIEALNRRPKFSDIDNKGTNNDEELPSLELSLKRPREVKEAGTTVQDERNILRRSDLSAFSRYNAAFNAKKSPTGCVGSNSPPNNSLEVTKKDSSRDVQSHSSGNPPNQNSNGASNNIDMDSTTNNAFTKSAVISEPAEASTTKKLYQTSAFQPIKNNLMCTSQQVVSHNKEDTTTTILAPPKIDKGSATQDFHHHYENHNNVANMQHQLPPEHDAESLKKMTAVAPHCESSNVVEVLVEGNMENYSINRSASGSNNGSNGQNGSSAAINAGGTNIDSNNGLAGNSGSGDASGNGSASRVYQNKNSQREAALIKFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSSNDNPSEATDS* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2979 745 MobiDBLite consensus disorder prediction 239 271 - -
Mal1g2979 745 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 722 IPR045279 GO:0009736
Mal1g2979 745 MobiDBLite consensus disorder prediction 479 503 - -
Mal1g2979 745 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Mal1g2979 745 MobiDBLite consensus disorder prediction 390 429 - -
Mal1g2979 745 SMART REC_2 85 200 IPR001789 GO:0000160
Mal1g2979 745 MobiDBLite consensus disorder prediction 707 725 - -
Mal1g2979 745 MobiDBLite consensus disorder prediction 209 283 - -
Mal1g2979 745 MobiDBLite consensus disorder prediction 451 469 - -
Mal1g2979 745 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Mal1g2979 745 MobiDBLite consensus disorder prediction 451 503 - -
Mal1g2979 745 Gene3D - 84 237 - -
Mal1g2979 745 MobiDBLite consensus disorder prediction 630 745 - -
Mal1g2979 745 MobiDBLite consensus disorder prediction 209 226 - -
Mal1g2979 745 MobiDBLite consensus disorder prediction 728 745 - -
Mal1g2979 745 SUPERFAMILY CheY-like 83 209 IPR011006 -
Mal1g2979 745 MobiDBLite consensus disorder prediction 630 690 - -
Mal1g2979 745 Pfam CCT motif 688 733 IPR010402 GO:0005515
Mal1g2979 745 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 29 722 - -
Mal1g2979 745 ProSiteProfiles CCT domain profile. 691 733 IPR010402 GO:0005515
Mal1g2979 745 CDD psREC_PRR 87 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2979 Mal-Chr1 43253752 43260983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2979 161 735 Response Regulator Gene Family AT5G02810 47.267 3.80e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mal1g2979 Response_reg 6.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2979 K12129 - gmx:100796933 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0004 1 64377 68811 Mal1g2979 1 43253752 43260983 ECH
Mal1g2979 1 43253752 43260983 Mal1g2979 1 43253752 43260983 ECH