Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2954 ATGAGAATATTTTGCTTGAGCCCTAAGACACTTTCAATGTCATCAACTTCATCCACAAGCACAACACCTTCAATCAGAAAAGCTATAGAACGTATAGAAGCAGCAGAAGCACTTATACAAAAATGGAATTCCGAAACCTCCGACTATGCCAAAGTAACTTCCCTTTTCTACAACGACAGATGCGAAGGCATTCAGTACATTCACCATGTTAACCAGCTTCAAAGAGCCATGCGCTCGTTACTAGAACTCGACCGGTCGTCTCCGAAACTCATCCACGCACAAAACCTAATGCAAATCGCCATGAAGAGGCTCGAAAAAGAGTTCTACCAGATATTAACCATGAACCAGGCCTACTTAGACTCTGAATCCGTCTCCGTTGGATCTTCTGGCACTTCCACATGGTCTTACTCTTATGACGGAGGAACACCGGAAGAAGACGATGTTCGCGCTGCAGAGGATTGTATCTCTGAAGTCGAACGTGTCTCTTCCGATTCGGTGGATGATTTGAGAATTATTGCTGGCTGCATGGTTAAAAACGGTTACGGTAAAGAATGCGTAAACGTATACAAAACAGTGAGAAAATCGACCATTGATGAAGGTATTTACAAACTCAATGTGGAGGAACGAAGCTTCTCGAAGGTCAATAAGATGGACTGGGAAGTTCTTGAGATGAAAATCAGGAGTTGGTTAGAGGCGGTTAAGATTTCTGTGAGAACACTCTTTGCCGGAGAGAGAAACCTCTGTGATCAGATTTTCACTTCGAATTCCATCAGAGAAGCTTGTTTTGGTGAAATTTCAAGAGATGGAGCTACTCTTCTCTTCCGATTTCCTGAACTCGTTGCAAAAACAAAGAAATTGACGCCGGAGAAGATTTTCCGTTTGCTTGATATGTATGCCGCAATAACCATGTTGTTACCAGAGATTGAATCGATTTTCTCATTCAATTCAACCTCTGGTGTTAAATCTCAAGCATATAATTCACAACAAAGACTCGTCGAATCTATAAGAAATATTTTCTCCGAAGTCAAGTCCGCAATCCTGAAGGACTCTTCCAAATCGCCGGCGAATTTCGGTGGTATTCATACCCTTACAACGCGAACAATGCAGCATCTTACCAATCTTGCAGATTACAGCAACGTGCTTTCTGAAATATTCTTCGACATTCCTCCGCCGTCGAATTCCCCATTGCTGGAATCTTACTTATACAGTCCAAAATCATCCAACAACTCGACGGAAACCGAAACTGGATTTTCCGTTCGAATAGCGTGGCTGATTCTGGTTCTTCTTTGCAAAATTGACGTCAAATCAAAGCAATGCAAGAATGTATCGTTATCATATCTATTTCTCGCAAACAATCTCCGGCACGTGGTGGAGAAGGTTCGTGCGTCGAACTTGCAATACGTTCTTGGCGATGATTGGTTGCTGAAGCACATGGAGAAGGTGAAACGATTGATTGAGAAGTACGAGAGAGTAGCATGGGGCGCAGTGGTTTCGTCACTGCCGAAAAATCCAACGGGGACGATATCAGTGGCGGAGGCGAGGGCGGTGTTTATGAAATTCAATCTAGAATTTGAGAAAGCTTATCGGAAACAGAATTTATTTGTCGTGCCGGAATCAGAATTTCGCGAAGAGATAAAAGCATCTCTGGGGCGAAAAATAATCCCGATTTATCGCGAGTTGTATGATACACATAAGATTGTGAAAGGATCCGAGACTGAAACGAATGAATATGTTTTATTTACCCCTGAAGATGTTCAGAATTACTTGGTGAATCTCTTCTGTGGGGAGAGAGAGCTTAACAATATATAA 1809 0.4245 MRIFCLSPKTLSMSSTSSTSTTPSIRKAIERIEAAEALIQKWNSETSDYAKVTSLFYNDRCEGIQYIHHVNQLQRAMRSLLELDRSSPKLIHAQNLMQIAMKRLEKEFYQILTMNQAYLDSESVSVGSSGTSTWSYSYDGGTPEEDDVRAAEDCISEVERVSSDSVDDLRIIAGCMVKNGYGKECVNVYKTVRKSTIDEGIYKLNVEERSFSKVNKMDWEVLEMKIRSWLEAVKISVRTLFAGERNLCDQIFTSNSIREACFGEISRDGATLLFRFPELVAKTKKLTPEKIFRLLDMYAAITMLLPEIESIFSFNSTSGVKSQAYNSQQRLVESIRNIFSEVKSAILKDSSKSPANFGGIHTLTTRTMQHLTNLADYSNVLSEIFFDIPPPSNSPLLESYLYSPKSSNNSTETETGFSVRIAWLILVLLCKIDVKSKQCKNVSLSYLFLANNLRHVVEKVRASNLQYVLGDDWLLKHMEKVKRLIEKYERVAWGAVVSSLPKNPTGTISVAEARAVFMKFNLEFEKAYRKQNLFVVPESEFREEIKASLGRKIIPIYRELYDTHKIVKGSETETNEYVLFTPEDVQNYLVNLFCGERELNNI* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2954 602 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 24 597 - -
Mal1g2954 602 SUPERFAMILY Cullin repeat-like 25 593 IPR016159 -
Mal1g2954 602 Coils Coil 25 45 - -
Mal1g2954 602 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 597 IPR004140 GO:0000145|GO:0006887
Mal1g2954 602 Pfam Exo70 exocyst complex subunit 228 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mal1g2954 602 Gene3D Exocyst complex component Exo70 49 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2954 Mal-Chr1 42804445 42806253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2954 32 593 EXO70 exocyst subunit family AT3G09520 50.526 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2954 K07195 - gmx:100798477 723.005