Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2948 ATGACTTGGGTTCGCGGTAAGATGCTAGGTAGTGGCAGCTTCGCCACCGTCAACTTAGCCACACACACAAAAGATTCTGGAACCTTTCCGCCTCTCACAGCCGTCAAATCCTCCGATACGTACGACTCCCATTTTCTGAAAAACGAGAAACAAATATTGGACCAATCTTATAATATTTTTCTTGAATACGCCGAAGGTGGTACTCTCTCCGACCAGCTCAAGAATCACGATGCTAAGTTTCCAGAAACCCTCGTTTGTCGTTACACAAGGTCGGTCGTTGAAGGACTCAAACATGTTCACGAAAACGGTTTTGTTTATTGTGACGTGAAGCTACAAAACATTCTGTATTTGACAATGGCAAAGTTAAGATTTCGGGTTTTGGTCTTGCAAAGGAGAAAGGGGGACTCCATGTATATGTCGCTCGAAGCAGTGAATGAGAGTGTTTATGAATCTCCAGCAGATATATGGGCTATTGGACGCGTCGTTGTGGAGATGGTTACTGGAAAGCCTACATGGAATGTAAGTAGCACGTCAAATATGTGGTCGTTGTTGGTTCGAATTGGAGTGGGAGAAGAAATACCGTTGATTCCAAATGAATTATCACAAGAAGGAAAAGATTTTCTTAAAAAGTGTTTTATTAAGGATCATTTGAAGAGATGGAGTGTAGAAATGCTTTTGCAACACCCTTTTATCTGCGATGATGAAAATATTTCATTGATGGAAGAGTTAATTAATGAGTCATCAATGTCATCAACATCTCCAAGGACGCACTTCGATTTTCCTCACTGGGACCACTTTGCCTCCTAA 807 0.4164 MTWVRGKMLGSGSFATVNLATHTKDSGTFPPLTAVKSSDTYDSHFLKNEKQILDQSYNIFLEYAEGGTLSDQLKNHDAKFPETLVCRYTRSVVEGLKHVHENGFVYCDVKLQNILYLTMAKLRFRVLVLQRRKGDSMYMSLEAVNESVYESPADIWAIGRVVVEMVTGKPTWNVSSTSNMWSLLVRIGVGEEIPLIPNELSQEGKDFLKKCFIKDHLKRWSVEMLLQHPFICDDENISLMEELINESSMSSTSPRTHFDFPHWDHFAS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2948 268 ProSiteProfiles Protein kinase domain profile. 3 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2948 268 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 55 264 - -
Mal1g2948 268 SMART serkin_6 3 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2948 268 Pfam Protein kinase domain 54 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2948 268 SUPERFAMILY Protein kinase-like (PK-like) 3 255 IPR011009 -
Mal1g2948 268 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 55 - -
Mal1g2948 268 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Mal1g2948 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 104 116 IPR008271 GO:0004672|GO:0006468
Mal1g2948 268 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 55 - -
Mal1g2948 268 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 55 264 - -
Mal1g2948 268 Gene3D Transferase(Phosphotransferase) domain 1 2 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2948 Mal-Chr1 42764564 42765467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2948 1 263 MAP Kinase Kinase Kinase AT5G67080 43.791 1.45e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal1g2948 Pkinase 7.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2948 - - aprc:113869133 306.219