Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2937 ATGAAAAGGCAGAGAGACGAAAGAGTGGAGAACATAGATTTGGCAAATTGTCTAATTCTACTCTCTCATCCCAAAGAAACCAAACCAAAGAAACATTTTAGTCCTTTGGAATTTGAATGCACCACATGCAACCGCAAGTTCTCTTCATTTCAAGCCCTAGGTGGCCATAGGGCTAGTCACAAAAAACCCAAACTAGATACCATCAAACTCAAACTACATGCCCAAACTTTAGGTTTGTTGAATAACCCCAAAACACATGGGTGCTACATTTGTGGTAAAGAATTTTCTCTTGGTCAGGCTTTGGGAGGACATATGAGAAGGCACAAAATTGGCGTCAATGAGGGGTTTTCTTTGGTGAAGAAAAATAAGGTTGTTGGAAAAATCCCAATATTGAAAAGATCGAATAGTAAGAGGGTTATGTGCTTGGACTTGAACTTAACACCTTTGCAAAATGACTTGAAGTTATTGTTCGGAAATATGACACCTAAAGTTGATTCTTTTGTTTGA 507 0.3826 MKRQRDERVENIDLANCLILLSHPKETKPKKHFSPLEFECTTCNRKFSSFQALGGHRASHKKPKLDTIKLKLHAQTLGLLNNPKTHGCYICGKEFSLGQALGGHMRRHKIGVNEGFSLVKKNKVVGKIPILKRSNSKRVMCLDLNLTPLQNDLKLLFGNMTPKVDSFV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2937 168 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Mal1g2937 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mal1g2937 168 SUPERFAMILY beta-beta-alpha zinc fingers 38 108 IPR036236 -
Mal1g2937 168 Gene3D Classic Zinc Finger 35 108 - -
Mal1g2937 168 SMART c2h2final6 86 108 IPR013087 -
Mal1g2937 168 SMART c2h2final6 38 60 IPR013087 -
Mal1g2937 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Mal1g2937 168 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 163 - -
Mal1g2937 168 Pfam C2H2-type zinc finger 86 109 - -
Mal1g2937 168 Pfam C2H2-type zinc finger 38 63 - -
Mal1g2937 168 PANTHER ZINC FINGER PROTEIN ZAT5 1 163 - -
Mal1g2937 168 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2937 Mal-Chr1 42437072 42437578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2937 1 165 C2H2 Transcription Factor Family AT2G37430 46.328 1.46e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g2937 zf-C2H2_6 5e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2937 - - aprc:113870747 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0113 1 1315926 1316522 Mal1g2937 1 42437072 42437578 ECH
Mal1g2937 1 42437072 42437578 Mal1g2937 1 42437072 42437578 ECH