Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2923 ATGGTTATGCAGAAGCATGATTGGTCTAGAGTTCAACACTTTGGTTGTTTATGTACTAAATTTGATGATTTATTTATATTGGTTGCTTATTTTGGGTACATTGTTTTGACTACCTCAGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAGGTCCTCGGTTTCTTCTAA 186 0.3602 MVMQKHDWSRVQHFGCLCTKFDDLFILVAYFGYIVLTTSAGIMDHEEARRKNVGGKVLGFF* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2923 61 ProSitePatterns Ribosomal protein S8 signature. 32 49 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mal1g2923 61 Gene3D - 18 61 - -
Mal1g2923 61 SUPERFAMILY Ribosomal protein S8 19 61 IPR035987 GO:0003735|GO:0005840|GO:0006412
Mal1g2923 61 Pfam Ribosomal protein S8 22 59 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mal1g2923 61 PANTHER RIBOSOMAL PROTEIN S15A 27 61 - -
Mal1g2923 61 PANTHER 40S RIBOSOMAL PROTEIN S15A 27 61 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2923 Mal-Chr1 41938839 41939742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2923 31 61 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 100.000 1.16e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2923 K02957 - twl:119990656 66.2402