Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2904 ATGACATCAAATCAAATTTCTGAGAGATCATCATCATCAATGGATATGGAATCATGTGTACCTCCAGGATTTAGATTTCATCCAACAGAAGAAGAACTTGTAGGGTATTACCTCAACAGAAAAATTAACTCACTCAAAATTGATCTAGATGTTATTGTTGAGGTTGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAACTAGGATATGAACAACAAAATGAGTGGTATTTTTTCAGCCACAAGGATAAGAAGTATCCAACAGGAACAAGAACTAATAGAGCCACTGCTGCTGGATTTTGGAAAGCTACTGGAAGGGACAAAGCTGTGACTTCCAAAAACAGAATAATAGGAATGAGGAAAACACTTGTTTTTTACAAGGGACGTGCCCCAAATGGAAGGAAAACTGATTGGATCATGCATGAATATAGATATCAAACCTCTGAACATGGTCCTCCACAGGCAAAAGGATGGGTTGTGTGCAGAGCATTTAAAAAGCCAAGTCCAAGTCATAGGCCAGGTTATGAACCATGGTATAGTAATCAACAACAACCACAATATTTCAGAGAAGATCAAAGCTATGCAACTACAAGACCTTTATCAATTACAGATATTTTGCATGAAAATCGTTTACTCCTTCATCATAATAATCCTTCAGCTGAAGAAGGTACAAGTTTTAGTCACCCCTTTAGCAATGATCAACAACAGTTTCTATCAAACCAAAACACTATTGTTATGGACAACAAACAACTCATTGAACTTCCACAGTTAGATAGTCCAACAACAAGTTTTGCAATCAAAGACAATGGCCTAACAATTGAAGAATATTGCAGTGAAGAAAGAAGCAATAATAATAATAACAATGGACAAGTAATTGATTGGAAAAGTTTGGATAATTTGTTCACTTCAAATCAATTTACAGATACAGCTAATTACTTTTCAAATCAAAATAGCATGCCATTGATGATACCTCATAGTCAACATGAGGTACAATATCAAAATCAAGCTAATCATCATATCTTAGGATGCTTTCCTGATTCATAA 1053 0.3504 MTSNQISERSSSSMDMESCVPPGFRFHPTEEELVGYYLNRKINSLKIDLDVIVEVDLYKIEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVTSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRYQTSEHGPPQAKGWVVCRAFKKPSPSHRPGYEPWYSNQQQPQYFREDQSYATTRPLSITDILHENRLLLHHNNPSAEEGTSFSHPFSNDQQQFLSNQNTIVMDNKQLIELPQLDSPTTSFAIKDNGLTIEEYCSEERSNNNNNNGQVIDWKSLDNLFTSNQFTDTANYFSNQNSMPLMIPHSQHEVQYQNQANHHILGCFPDS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2904 350 ProSiteProfiles NAC domain profile. 20 169 IPR003441 GO:0003677|GO:0006355
Mal1g2904 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 18 323 - -
Mal1g2904 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 323 - -
Mal1g2904 350 SUPERFAMILY NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Mal1g2904 350 Pfam No apical meristem (NAM) protein 21 147 IPR003441 GO:0003677|GO:0006355
Mal1g2904 350 Gene3D NAC domain 29 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2904 Mal-Chr1 41526581 41529403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2904 16 350 NAC Transcription Factor Family AT1G71930 53.161 1.72e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g2904 NAM 5.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2904 - - gmx:100811057 478.018